RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
TRIM41-207ENST00000515223 PGK2P07205 417 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 WWOXQ9NZC7 414 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 OXCT1P55809 520 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 HIC1Q14526 733 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 CATSPER1Q8NEC5 780 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 A0A087X0B3 334 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 IRAK1BP1Q5VVH5 260 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 TFB1MQ8WVM0 346 aaKnown RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 ZNF669Q96BR6 464 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 PPP1R36Q96LQ0 422 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 ARL2BPQ9Y2Y0 163 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 USP15Q9Y4E8 981 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 NR2E3Q9Y5X4 410 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 FAM47DPA6NHR8 397 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 PJA2O43164 708 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 PMPCBO75439 489 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 DARSP14868 501 aaKnown RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 SKOR1P84550 965 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 LRRC23Q53EV4 343 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 CIPCQ9C0C6 399 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 GSNP06396 782 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 LHX1P48742 406 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 ATXN3P54252 364 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 EARS2Q5JPH6 523 aaKnown RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-207ENST00000515223 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 SYTL2Q9HCH5 934 aa16.63■□□□□ 0.25
TRIM41-207ENST00000515223 KIDINS220Q9ULH0 1771 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 VWA5AO00534 786 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 CAMK2GQ13555 558 aaPredicted RBP16.62■□□□□ 0.25
TRIM41-207ENST00000515223 CUL2Q13617 745 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 TIGD7Q6NT04 549 aaPredicted RBP16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ZNF438Q7Z4V0 828 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 JAMLQ86YT9 394 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 CARNMT1Q8N4J0 409 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ZNF555Q8NEP9 628 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 FAM118BQ9BPY3 351 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 CHMP2BQ9UQN3 213 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ZSCAN5CA6NGD5 496 aaPredicted RBP16.62■□□□□ 0.25
TRIM41-207ENST00000515223 KRT8P05787 483 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 SNRPAP09012 282 aaKnown RBP16.62■□□□□ 0.25
TRIM41-207ENST00000515223 TMEM253P0C7T8 217 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 KPNA1P52294 538 aaPredicted RBP16.62■□□□□ 0.25
TRIM41-207ENST00000515223 HERC6Q8IVU3 1022 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 WDR41Q9HAD4 459 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 VDRP11473 427 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 GRK3P35626 688 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 TMED1Q13445 227 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 VCAM1P19320 739 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 PHACTR4Q8IZ21 702 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 ARMC2Q8NEN0 867 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 BLOC1S5Q8TDH9 187 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 SKA1Q96BD8 255 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 NMRK2Q9NPI5 230 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 PCMTD2Q9NV79 361 aa16.62■□□□□ 0.25
TRIM41-207ENST00000515223 MSH4O15457 936 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 GLI1P08151 1106 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 FDFT1P37268 417 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 AMHR2Q16671 573 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 FAM83EQ2M2I3 478 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 MTG1Q9BT17 334 aaPredicted RBP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 KCND1Q9NSA2 647 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 TMEM39AQ9NV64 488 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 PLAGL2Q9UPG8 496 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 ALDH18A1P54886 795 aaKnown RBP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 CSE1LP55060 971 aaKnown RBP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 SMTNL2Q2TAL5 461 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 NOD2Q9HC29 1040 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 LNPEPQ9UIQ6 1025 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 VPS28Q9UK41 221 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 RGL2O15211 777 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 CAND2O75155 1236 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 FBXO21O94952 628 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 TRIM16O95361 564 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 RAB27AP51159 221 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 ANKS6Q68DC2 871 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 CDK5RAP1Q96SZ6 601 aaKnown RBP16.61■□□□□ 0.25
TRIM41-207ENST00000515223 GID8Q9NWU2 228 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 A0A087X0T9 212 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 FAM228BP0C875 321 aa16.61■□□□□ 0.25
TRIM41-207ENST00000515223 MLNP12872 115 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms