RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 C2CD4BA6NLJ0 364 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 TCP11X1B4DZS4 312 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 PRPF4O43172 522 aaKnown RBP eCLIP15.56■□□□□ 0.08
NUP54-217ENST00000514987 SNX3O60493 162 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ENDOD1O94919 500 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ZNF286BP0CG31 522 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ETS1P14921 441 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ADCYAP1R1P41586 468 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 CTCFP49711 727 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 EIF3EP60228 445 aaKnown RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 DYNLT1P63172 113 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 PDIA2Q13087 525 aaKnown RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 TMED2Q15363 201 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 SMTNL2Q2TAL5 461 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 DUSP28Q4G0W2 176 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 BOLA3Q53S33 107 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ANKRD23Q86SG2 305 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 PRUNE1Q86TP1 453 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 TRABD2AQ86V40 505 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 CYP4X1Q8N118 509 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 EMC1Q8N766 993 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 LRRC52Q8N7C0 313 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 GBP7Q8N8V2 638 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 ANKRD42Q8N9B4 389 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 STK32AQ8WU08 396 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 TEKT4Q8WW24 435 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 FRMD8Q9BZ67 464 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 GCOM2Q9BZD3 368 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 VPS37BQ9H9H4 285 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 SSU72Q9NP77 194 aaKnown RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 TJP2Q9UDY2 1190 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 USP15Q9Y4E8 981 aaPredicted RBP15.56■□□□□ 0.08
NUP54-217ENST00000514987 RALGAPA2Q2PPJ7 1873 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 CITO14578 2027 aa15.56■□□□□ 0.08
NUP54-217ENST00000514987 ZNF487B1APH4 448 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 E7ESA3 106 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 PRPSAP2O60256 369 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 DNAJC8O75937 253 aaPredicted RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 SNAI1O95863 264 aaPredicted RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 OAS1P00973 400 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 PDGFRAP16234 1089 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 ATP2A2P16615 1042 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 RPL22P35268 128 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 SCTRP47872 440 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 YARSP54577 528 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 CBLBQ13191 982 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 IRF5Q13568 498 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 ZC3H12AQ5D1E8 599 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 KCNT1Q5JUK3 1230 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 GJC2Q5T442 439 aaPredicted RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 OR6B2Q6IFH4 312 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 DPP9Q86TI2 863 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 UNC93AQ86WB7 457 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 ZBED8Q8IZ13 594 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 MGARPQ8TDB4 240 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 PYROXD1Q8WU10 500 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 HSPH1Q92598 858 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 TBCBQ99426 244 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 CALN1Q9BXU9 219 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 ABHD16BQ9H3Z7 469 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 GBA2Q9HCG7 927 aaPredicted RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 PSMC3IPQ9P2W1 217 aaPredicted RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 PCSK1NQ9UHG2 260 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
NUP54-217ENST00000514987 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.55■□□□□ 0.08
NUP54-217ENST00000514987 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 IQCA1LA6NCM1 817 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 CSDE1O75534 798 aaKnown RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 MMP3P08254 477 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 GEMIN4P57678 1058 aaKnown RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 ROR1Q01973 937 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 ORC1Q13415 861 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 LRRC14Q15048 493 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 EFHC2Q5JST6 749 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 MARCH8Q5T0T0 291 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 C4orf22Q6V702 233 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 TRPM8Q7Z2W7 1104 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 PNMA8AQ86V59 439 aaPredicted RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 SESTD1Q86VW0 696 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 SUGP1Q8IWZ8 645 aaKnown RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 PDIK1LQ8N165 341 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 BEST2Q8NFU1 509 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 OR6J1Q8NGC5 347 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 UBA3Q8TBC4 463 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 RXFP2Q8WXD0 754 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 CPT1BQ92523 772 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 SMC6Q96SB8 1091 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 SLC5A4Q9NY91 659 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 HESX1Q9UBX0 185 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 ZMYND8Q9ULU4 1186 aaPredicted RBP15.54■□□□□ 0.08
NUP54-217ENST00000514987 ARL2BPQ9Y2Y0 163 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 SCN4AP35499 1836 aa15.54■□□□□ 0.08
NUP54-217ENST00000514987 DNM1LO00429 736 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TOMM70O94826 608 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms