RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 DUSP4Q13115 394 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PLD1Q13393 1074 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC18A3Q16572 532 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CLEC16AQ2KHT3 1053 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 RAB41Q5JT25 222 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 ADGRD2Q7Z7M1 963 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 WDTC1Q8N5D0 677 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 ZMIZ2Q8NF64 920 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 VCPIP1Q96JH7 1222 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC42Q96M95 316 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PCDHB18PQ96TA0 734 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC4A5Q9BY07 1137 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CRISPLD1Q9H336 500 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 TLE6Q9H808 572 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 TMEM30AQ9NV96 361 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 ABI2Q9NYB9 513 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 IL37Q9NZH6 218 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 OBSL1O75147 1896 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 FAM92AA1XBS5 289 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 HHLA1C9JL84 531 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 TNFRSF10BO14763 440 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 NCK2O43639 380 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 NRDCO43847 1150 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 SEC24AO95486 1093 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 HNRNPA1P09651 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ELF1P32519 619 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ACADSBP45954 432 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 GABRB2P47870 512 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 GSCP56915 257 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 SNX16P57768 344 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 PDE4CQ08493 712 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 DENND1BQ6P3S1 775 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 TMEM110Q86TL2 294 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 EFHBQ8N7U6 833 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 PPM1EQ8WY54 764 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 NOX5Q96PH1 765 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 MIS12Q9H081 205 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ZDHHC7Q9NXF8 308 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ADAMTS1Q9UHI8 967 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 ASB3Q9Y575 518 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 INSL5Q9Y5Q6 135 aa12.65□□□□□ -0.38
PDLIM5-220ENST00000514830 NCANO14594 1321 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 A0A087X0T9 212 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 EIF3CLB5ME19 914 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 F8VP50 259 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ARHGAP6O43182 974 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 RTN2O75298 545 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ZMYND10O75800 440 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 BEST1O76090 585 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 FAM228BP0C875 321 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ATF6P18850 670 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 MMP8P22894 467 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CA8P35219 290 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CYLC1P35663 651 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 GRIK1P39086 918 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 NRIP1P48552 1158 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 KIF11P52732 1056 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CACNA2D1P54289 1103 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CCZ1BP86790 482 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 PDCLQ13371 301 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ACAD10Q6JQN1 1059 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 PIGZQ86VD9 579 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 MSANTD4Q8NCY6 345 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 TRMT2BQ96GJ1 504 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 MYRFLQ96LU7 910 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ASB2Q96Q27 587 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 EIF3CQ99613 913 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 PDCL3Q9H2J4 239 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CYP4F11Q9HBI6 524 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 DZANK1Q9NVP4 752 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 CYTH4Q9UIA0 394 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 YIPF1Q9Y548 306 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms