RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 CCDC170Q8IYT3 715 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TDRD5Q8NAT2 981 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 KIF18AQ8NI77 898 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 PSMG2Q969U7 264 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 NIF3L1Q9GZT8 377 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 PLCB1Q9NQ66 1216 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 HCFC1R1Q9NWW0 138 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TRMT1Q9NXH9 659 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 NME7Q9Y5B8 376 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 BDP1A6H8Y1 2624 aa8.83□□□□□ -1
CCL28-204ENST00000514421 SOAT2O75908 522 aa8.83□□□□□ -1
CCL28-204ENST00000514421 LCA5LO95447 670 aa8.83□□□□□ -1
CCL28-204ENST00000514421 CSH1P0DML2 217 aa8.83□□□□□ -1
CCL28-204ENST00000514421 CSH2P0DML3 217 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MYL4P12829 197 aa8.83□□□□□ -1
CCL28-204ENST00000514421 LAMP2P13473 410 aa8.83□□□□□ -1
CCL28-204ENST00000514421 SP100P23497 879 aaPredicted RBP8.83□□□□□ -1
CCL28-204ENST00000514421 BDNFP23560 247 aa8.83□□□□□ -1
CCL28-204ENST00000514421 TBXAS1P24557 533 aaPredicted RBP8.83□□□□□ -1
CCL28-204ENST00000514421 GRIK1P39086 918 aa8.83□□□□□ -1
CCL28-204ENST00000514421 EPHA5P54756 1037 aa8.83□□□□□ -1
CCL28-204ENST00000514421 YWHAEP62258 255 aaKnown RBP8.83□□□□□ -1
CCL28-204ENST00000514421 CYP27A1Q02318 531 aa8.83□□□□□ -1
CCL28-204ENST00000514421 INCA1Q0VD86 236 aa8.83□□□□□ -1
CCL28-204ENST00000514421 KCNMA1Q12791 1236 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MTF1Q14872 753 aa8.83□□□□□ -1
CCL28-204ENST00000514421 DDR2Q16832 855 aa8.83□□□□□ -1
CCL28-204ENST00000514421 PDZD4Q76G19 769 aaPredicted RBP8.83□□□□□ -1
CCL28-204ENST00000514421 ACOT1Q86TX2 421 aa8.83□□□□□ -1
CCL28-204ENST00000514421 SCN4BQ8IWT1 228 aa8.83□□□□□ -1
CCL28-204ENST00000514421 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
CCL28-204ENST00000514421 TTC9BQ8N6N2 239 aa8.83□□□□□ -1
CCL28-204ENST00000514421 B3GALNT2Q8NCR0 500 aa8.83□□□□□ -1
CCL28-204ENST00000514421 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
CCL28-204ENST00000514421 LMO3Q8TAP4 145 aa8.83□□□□□ -1
CCL28-204ENST00000514421 ITFG1Q8TB96 612 aa8.83□□□□□ -1
CCL28-204ENST00000514421 GIPC2Q8TF65 315 aa8.83□□□□□ -1
CCL28-204ENST00000514421 BAP1Q92560 729 aa8.83□□□□□ -1
CCL28-204ENST00000514421 NXPE3Q969Y0 559 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MYLPFQ96A32 169 aa8.83□□□□□ -1
CCL28-204ENST00000514421 PCED1BQ96HM7 432 aa8.83□□□□□ -1
CCL28-204ENST00000514421 CEP295NLQ96MC4 621 aa8.83□□□□□ -1
CCL28-204ENST00000514421 NT5C1BQ96P26 610 aa8.83□□□□□ -1
CCL28-204ENST00000514421 PHF12Q96QT6 1004 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MYADMQ96S97 322 aa8.83□□□□□ -1
CCL28-204ENST00000514421 LPIN3Q9BQK8 851 aa8.83□□□□□ -1
CCL28-204ENST00000514421 NT5C1AQ9BXI3 368 aa8.83□□□□□ -1
CCL28-204ENST00000514421 LRRC3Q9BY71 257 aa8.83□□□□□ -1
CCL28-204ENST00000514421 B3GNT5Q9BYG0 378 aa8.83□□□□□ -1
CCL28-204ENST00000514421 GPR88Q9GZN0 384 aa8.83□□□□□ -1
CCL28-204ENST00000514421 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
CCL28-204ENST00000514421 DPEP3Q9H4B8 488 aa8.83□□□□□ -1
CCL28-204ENST00000514421 ASAH2Q9NR71 780 aa8.83□□□□□ -1
CCL28-204ENST00000514421 GDE1Q9NZC3 331 aa8.83□□□□□ -1
CCL28-204ENST00000514421 IGSF9Q9P2J2 1179 aa8.83□□□□□ -1
CCL28-204ENST00000514421 EPS15L1Q9UBC2 864 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MYO1AQ9UBC5 1043 aa8.83□□□□□ -1
CCL28-204ENST00000514421 CDH7Q9ULB5 785 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MYO6Q9UM54 1294 aa8.83□□□□□ -1
CCL28-204ENST00000514421 DAAM1Q9Y4D1 1078 aa8.83□□□□□ -1
CCL28-204ENST00000514421 ATG2AQ2TAZ0 1938 aa8.83□□□□□ -1
CCL28-204ENST00000514421 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
CCL28-204ENST00000514421 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
CCL28-204ENST00000514421 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
CCL28-204ENST00000514421 TRIM66O15016 1216 aa8.82□□□□□ -1
CCL28-204ENST00000514421 FANCGO15287 622 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CILPO75339 1184 aa8.82□□□□□ -1
CCL28-204ENST00000514421 NOL4O94818 638 aa8.82□□□□□ -1
CCL28-204ENST00000514421 NDUFA10O95299 355 aa8.82□□□□□ -1
CCL28-204ENST00000514421 FGF19O95750 216 aa8.82□□□□□ -1
CCL28-204ENST00000514421 ALADP13716 330 aa8.82□□□□□ -1
CCL28-204ENST00000514421 ATF6P18850 670 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CD58P19256 250 aa8.82□□□□□ -1
CCL28-204ENST00000514421 GPR15P49685 360 aa8.82□□□□□ -1
CCL28-204ENST00000514421 KLK7P49862 253 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CUL2Q13617 745 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CCDC142Q17RM4 750 aa8.82□□□□□ -1
CCL28-204ENST00000514421 PRSS36Q5K4E3 855 aa8.82□□□□□ -1
CCL28-204ENST00000514421 GBP6Q6ZN66 633 aa8.82□□□□□ -1
CCL28-204ENST00000514421 PAQR9Q6ZVX9 377 aa8.82□□□□□ -1
CCL28-204ENST00000514421 GET4Q7L5D6 327 aaPredicted RBP8.82□□□□□ -1
CCL28-204ENST00000514421 WHAMMQ8TF30 809 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CPLX3Q8WVH0 158 aa8.82□□□□□ -1
CCL28-204ENST00000514421 FGF13Q92913 245 aa8.82□□□□□ -1
CCL28-204ENST00000514421 TCEAL4Q96EI5 215 aa8.82□□□□□ -1
CCL28-204ENST00000514421 MCRS1Q96EZ8 462 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CYFIP2Q96F07 1278 aa8.82□□□□□ -1
CCL28-204ENST00000514421 TMEM176AQ96HP8 235 aa8.82□□□□□ -1
CCL28-204ENST00000514421 SPATA17Q96L03 361 aa8.82□□□□□ -1
CCL28-204ENST00000514421 C8orf48Q96LL4 319 aa8.82□□□□□ -1
CCL28-204ENST00000514421 HEXIM2Q96MH2 286 aaKnown RBP8.82□□□□□ -1
CCL28-204ENST00000514421 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
CCL28-204ENST00000514421 HNRNPABQ99729 332 aaKnown RBP8.82□□□□□ -1
CCL28-204ENST00000514421 MED10Q9BTT4 135 aa8.82□□□□□ -1
CCL28-204ENST00000514421 ELOVL4Q9GZR5 314 aa8.82□□□□□ -1
CCL28-204ENST00000514421 CISHQ9NSE2 258 aa8.82□□□□□ -1
CCL28-204ENST00000514421 KIAA1257Q9ULG3 409 aa8.82□□□□□ -1
CCL28-204ENST00000514421 EPN1Q9Y6I3 576 aaPredicted RBP8.82□□□□□ -1
CCL28-204ENST00000514421 MYO10Q9HD67 2058 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms