RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 A0A1W2PQF6 199 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 H0Y8X5 98 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 N4BP3O15049 544 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ITGB6P18564 788 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 TNFRSF8P28908 595 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 CCT8P50990 548 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 GABREP78334 506 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SPAG1Q07617 926 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 RESTQ13127 1097 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SKIDA1Q1XH10 827 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 GAB4Q2WGN9 574 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ARMCX5Q6P1M9 558 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 FBXL19Q6PCT2 694 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 OTUD6AQ7L8S5 288 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 IFNLR1Q8IU57 520 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 TPH2Q8IWU9 490 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ARL14EPQ8N8R7 260 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 SNRNP27Q8WVK2 155 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 DNASE2BQ8WZ79 361 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 MRGPRX1Q96LB2 322 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 CCDC43Q96MW1 224 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 GLT8D2Q9H1C3 349 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 POLR3FQ9H1D9 316 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 PRMT7Q9NVM4 692 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 MAFFQ9ULX9 164 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ANKRD6Q9Y2G4 727 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 PCDHGB2Q9Y5G2 931 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SDK2Q58EX2 2172 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 C2orf78A6NCI8 922 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 WASH3PC4AMC7 463 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 TRIM24O15164 1050 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 USO1O60763 962 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 LDOC1O95751 146 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 F11P03951 625 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 CYP17A1P05093 508 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 P4HBP07237 508 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 CD6P30203 668 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 GRIK1P39086 918 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 AFMP43652 599 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 GPR15P49685 360 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ACADVLP49748 655 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 AFF3P51826 1226 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 YARSP54577 528 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 ZXDBP98169 803 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 LINC00303Q3SY05 128 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 KCNT1Q5JUK3 1230 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 C10orf76Q5T2E6 689 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 B3GNT9Q6UX72 402 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ADAT2Q7Z6V5 191 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 FAM124AQ86V42 546 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 EID2Q8N6I1 236 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 TBCKQ8TEA7 893 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 IPO4Q8TEX9 1081 aaKnown RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 LRRC15Q8TF66 581 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 TMEM87BQ96K49 555 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 PRIMPOLQ96LW4 560 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 KIFC3Q9BVG8 833 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 LNPKQ9C0E8 428 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SLC38A7Q9NVC3 462 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ABI2Q9NYB9 513 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 NAP1L2Q9ULW6 460 aaPredicted RBP3.53□□□□□ -1.84
CHD1-211ENST00000514344 PCDHGA1Q9Y5H4 931 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 SVILO95425 2214 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 OBSL1O75147 1896 aa3.53□□□□□ -1.84
CHD1-211ENST00000514344 ZFC3H1O60293 1989 aaKnown RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 APCP25054 2843 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 HIP1O00291 1037 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 SH2B2O14492 632 aaPredicted RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 USP12O75317 370 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 OAZ2O95190 189 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 HARSP12081 509 aaKnown RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 ABCB4P21439 1286 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 NTSR1P30989 418 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 ARL2P36404 184 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 TUFMP49411 452 aaKnown RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 ATP2C1P98194 919 aaPredicted RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 HNRNPUQ00839 825 aaKnown RBP eCLIP3.52□□□□□ -1.85
CHD1-211ENST00000514344 POU5F1BQ06416 359 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 KCNB1Q14721 858 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 EGFLAMQ63HQ2 1017 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 OVOS1Q6IE37 1185 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 PPP4R3AQ6IN85 833 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 FOXR1Q6PIV2 292 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 FILIP1Q7Z7B0 1213 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 MON1AQ86VX9 555 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 ZBTB8OSQ8IWT0 167 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 OR10T2Q8NGX3 314 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 OXER1Q8TDS5 423 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 DYDC2Q96IM9 177 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 VCPIP1Q96JH7 1222 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 DRC1Q96MC2 740 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 ZNF578Q96N58 590 aaPredicted RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 NFKBIZQ9BYH8 718 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 ZMYND12Q9H0C1 365 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 POLD4Q9HCU8 107 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 RTN4Q9NQC3 1192 aaKnown RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 TOPORSQ9NS56 1045 aaPredicted RBP3.52□□□□□ -1.85
CHD1-211ENST00000514344 SMPD4Q9NXE4 827 aa3.52□□□□□ -1.85
CHD1-211ENST00000514344 TUBGCP4Q9UGJ1 667 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms