RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 NEBLO76041 1014 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 GSTA2P09210 222 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 RRM1P23921 792 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MATR3P43243 847 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PSMC1P62191 440 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 FMO1Q01740 532 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SULT2A1Q06520 285 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PPIGQ13427 754 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PGM2L1Q6PCE3 622 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 CLNKQ7Z7G1 428 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 TBC1D1Q86TI0 1168 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 FAM126BQ8IXS8 530 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MCPH1Q8NEM0 835 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SLC35B4Q969S0 331 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 RBM41Q96IZ5 413 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 FBXL18Q96ME1 805 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 REEP2Q9BRK0 252 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SLC2A11Q9BYW1 496 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 WNT8AQ9H1J5 351 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 UNC45AQ9H3U1 944 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MMRN2Q9H8L6 949 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 KAT6AQ92794 2004 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 DYTNA2CJ06 578 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 FOXO6A8MYZ6 492 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 TCP11X1B4DZS4 312 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MAGEC1O60732 1142 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 LRRN2O75325 713 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 TJP3O95049 919 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 MLLT1Q03111 559 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 APOFQ13790 326 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PPP1R7Q15435 360 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 ACSBG2Q5FVE4 666 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 EFHC2Q5JST6 749 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 KYAT3Q6YP21 454 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 ZNF410Q86VK4 478 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SLC7A14Q8TBB6 771 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 EPS8L1Q8TE68 723 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PAWRQ96IZ0 340 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 UBE2OQ9C0C9 1292 aaKnown RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SUDS3Q9H7L9 328 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 WRAP73Q9P2S5 460 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-205ENST00000514271 SSX2IPQ9Y2D8 614 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 ATP8A1Q9Y2Q0 1164 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 PCDHGA4Q9Y5G9 962 aa7.79□□□□□ -1.16
CLIP1-205ENST00000514271 M0QZ92 97 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 AP1G2O75843 785 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PGK1P00558 417 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PLA2G4BP0C869 781 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 CD53P19397 219 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 ITIH2P19823 946 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 CDC25CP30307 473 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 FMO5P49326 533 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 SP2Q02086 613 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 SLC18A2Q05940 514 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PRKD1Q15139 912 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 KRT71Q3SY84 523 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 GJC2Q5T442 439 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 RNF187Q5TA31 235 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 ATG14Q6ZNE5 492 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 RHOT2Q8IXI1 618 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 TMEM199Q8N511 208 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 ZCCHC9Q8N567 271 aaKnown RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 OSBPL1AQ9BXW6 950 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PAPOLBQ9NRJ5 636 aaKnown RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 LRCH1Q9Y2L9 728 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 POTEB3A0JP26 581 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 ADCY6O43306 1168 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 DGAT1O75907 488 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 BAIAP3O94812 1187 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 ALOX15P16050 662 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 MYBPC3Q14896 1274 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 BORAQ6PGQ7 559 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 POTEBQ6S5H4 581 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 C3orf62Q6ZUJ4 267 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 PCGF5Q86SE9 256 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 TTC8Q8TAM2 541 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 SHC3Q92529 594 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 DCLK3Q9C098 648 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 DMAP1Q9NPF5 467 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 INTS9Q9NV88 658 aaKnown RBP7.78□□□□□ -1.16
CLIP1-205ENST00000514271 APEX2Q9UBZ4 518 aa7.78□□□□□ -1.16
CLIP1-205ENST00000514271 VILLO15195 856 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 ATP9AO75110 1047 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 TBX10O75333 385 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 RECKO95980 971 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 H2AFZP0C0S5 128 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SMIM10L2AP0DMW4 78 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SMIM10L2BP0DMW5 78 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 EN2P19622 333 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-205ENST00000514271 PTPN4P29074 926 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 PEX19P40855 299 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 CCNFP41002 786 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 GPX6P59796 221 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 ADAM17P78536 824 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 OASLQ15646 514 aaKnown RBP7.77□□□□□ -1.16
CLIP1-205ENST00000514271 HSDL1Q3SXM5 330 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms