RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 UBE4BO95155 1302 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
SNHG4-208ENST00000514110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
SNHG4-208ENST00000514110 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 F8VP50 259 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 AXIN1O15169 862 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 GDF9O60383 454 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 TACC1O75410 805 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 RPP40O75818 363 aaKnown RBP13.03□□□□□ -0.32
SNHG4-208ENST00000514110 TCF3P15923 654 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 ANXA13P27216 316 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 CACNA2D1P54289 1103 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 CUL4BQ13620 913 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
SNHG4-208ENST00000514110 CCDC6Q16204 474 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 CD101Q93033 1021 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 HHIPQ96QV1 700 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 TTLL2Q9BWV7 592 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 ARRDC1-AS1Q9H2J1 176 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 ARHGAP26Q9UNA1 814 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
SNHG4-208ENST00000514110 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.32
SNHG4-208ENST00000514110 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.32
SNHG4-208ENST00000514110 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.32
SNHG4-208ENST00000514110 EML5Q05BV3 1969 aa13.02□□□□□ -0.32
SNHG4-208ENST00000514110 ZNF840PA6NDX5 716 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 SLC30A4O14863 429 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 TRIM66O15016 1216 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 ZSCAN22P10073 491 aaPredicted RBP13.02□□□□□ -0.33
SNHG4-208ENST00000514110 PTPN1P18031 435 aaKnown RBP13.02□□□□□ -0.33
SNHG4-208ENST00000514110 AFMP43652 599 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 CASP4P49662 377 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 MYL6P60660 151 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
SNHG4-208ENST00000514110 NOP14P78316 857 aaKnown RBP13.02□□□□□ -0.33
SNHG4-208ENST00000514110 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 FBXO43Q4G163 708 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 RESP18Q5W5W9 173 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 OR6B3Q8NGW1 331 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 PLEKHO2Q8TD55 490 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 SNX21Q969T3 373 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 C8orf48Q96LL4 319 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 CEP295NLQ96MC4 621 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 RNF38Q9H0F5 515 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 TRPM5Q9NZQ8 1165 aa13.02□□□□□ -0.33
SNHG4-208ENST00000514110 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 PVALEFA0A1B0GWK0 134 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 LEFTY2O00292 366 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 CLDN5O00501 218 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 F13A1P00488 732 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 FAM163BP0C2L3 166 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 PFKLP17858 780 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 OPRD1P41143 372 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 ME1P48163 572 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 PDE6CP51160 858 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 TNNC1P63316 161 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 SLC7A9P82251 487 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 NR1H3Q13133 447 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 PSMD2Q13200 908 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 TRPC3Q13507 836 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 SF3A2Q15428 464 aaKnown RBP13.01□□□□□ -0.33
SNHG4-208ENST00000514110 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
SNHG4-208ENST00000514110 GAB4Q2WGN9 574 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 ELMO3Q96BJ8 720 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 LOXL4Q96JB6 756 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
SNHG4-208ENST00000514110 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
SNHG4-208ENST00000514110 A8MXQ7 604 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
SNHG4-208ENST00000514110 EXOC3O60645 756 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 AKAP3O75969 853 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 EPN2O95208 641 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 NFATC1O95644 943 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
SNHG4-208ENST00000514110 ABL1P00519 1130 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 OAS1P00973 400 aaKnown RBP13□□□□□ -0.33
SNHG4-208ENST00000514110 ZNF806P0C7X5 589 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 ATICP31939 592 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 CDH8P55286 799 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 IFRD2Q12894 506 aaPredicted RBP13□□□□□ -0.33
SNHG4-208ENST00000514110 TAF10Q12962 218 aa13□□□□□ -0.33
SNHG4-208ENST00000514110 PKP1Q13835 747 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms