RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ALG6Q9Y672 507 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 TMEM110-MUSTN1A8MSY1 372 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 ACKR2O00590 384 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 TNFRSF10BO14763 440 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 DCXO43602 365 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PHF2O75151 1096 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 C4BPAP04003 597 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 LGALS2P05162 132 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 CLTAP09496 248 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 SMIM10L2AP0DMW4 78 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 SMIM10L2BP0DMW5 78 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 IL9P15248 144 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 GNA15P30679 374 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 GRM5P41594 1212 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 GDF10P55107 478 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 EIF3BP55884 814 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 SNX16P57768 344 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PTENP60484 403 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 ADAM17P78536 824 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 ZNF200P98182 395 aaPredicted RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 DR1Q01658 176 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 FMO1Q01740 532 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 SP2Q02086 613 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 LMNB2Q03252 620 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 LAMTOR4Q0VGL1 99 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 GPM6BQ13491 265 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 CAPSQ13938 189 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
MSH3-203ENST00000512531 SLC39A4Q6P5W5 647 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 SLC47A2Q86VL8 602 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 CD302Q8IX05 232 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 RNF149Q8NC42 400 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 C1orf131Q8NDD1 294 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 CCHCR1Q8TD31 782 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 ASAP3Q8TDY4 903 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 SLC20A1Q8WUM9 679 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 KREMEN1Q96MU8 473 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 STMN4Q9H169 189 aaPredicted RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 IKZF4Q9H2S9 585 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 RNPEPQ9H4A4 650 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
MSH3-203ENST00000512531 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PARVAQ9NVD7 372 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 ADAM21Q9UKJ8 722 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 PCDHA3Q9Y5H8 950 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 USP3Q9Y6I4 520 aa10.04□□□□□ -0.8
MSH3-203ENST00000512531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 TREHO43280 583 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 RAD51CO43502 376 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 PSTPIP1O43586 416 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 SORBS3O60504 671 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 LILRA1O75019 489 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 GAS8O95995 478 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 MMEP08473 750 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ATICP31939 592 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 CTNNA1P35221 906 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 LMAN1P49257 510 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 FNTAP49354 379 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ACOT2P49753 483 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 DRG2P55039 364 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 NLRP11P59045 1033 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 RNASE9P60153 205 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 FOXK2Q01167 660 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 CENPCQ03188 943 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ZP2Q05996 745 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 MCL1Q07820 350 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 CTC1Q2NKJ3 1217 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 RALGAPA2Q2PPJ7 1873 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ZNF568Q3ZCX4 644 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 FAM117BQ6P1L5 589 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 TAF2Q6P1X5 1199 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 TSHZ1Q6ZSZ6 1077 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 HOOK3Q86VS8 718 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 RHPN2Q8IUC4 686 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ADHFE1Q8IWW8 467 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 TMEM35BQ8NCS4 154 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 SEMA4DQ92854 862 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 C11orf84Q9BUA3 381 aaPredicted RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 RBCK1Q9BYM8 510 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms