RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ZNF852Q6ZMS4 543 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 DENND5BQ6ZUT9 1274 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 MON1AQ86VX9 555 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 ZC3H3Q8IXZ2 948 aaKnown RBP14.13□□□□□ -0.15
RNF4-215ENST00000511843 FUKQ8N0W3 1084 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CELF5Q8N6W0 485 aaKnown RBP14.13□□□□□ -0.15
RNF4-215ENST00000511843 C12orf29Q8N999 325 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CSGALNACT1Q8TDX6 532 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 TAF4BQ92750 862 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 ARID3AQ99856 593 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 IMPG2Q9BZV3 1241 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 NIF3L1Q9GZT8 377 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 KRT82Q9NSB4 513 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 TDP1Q9NUW8 608 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 UXTQ9UBK9 157 aaPredicted RBP14.13□□□□□ -0.15
RNF4-215ENST00000511843 CTNND2Q9UQB3 1225 aa14.13□□□□□ -0.15
RNF4-215ENST00000511843 CACNA1HO95180 2353 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 PPP1R3GB7ZBB8 358 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 PSMA7O14818 248 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 AP1G2O75843 785 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 BEST1O76090 585 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 ABL1P00519 1130 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 CKMP06732 381 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 ADORA2BP29275 332 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 KPNA1P52294 538 aaPredicted RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 FKBP3Q00688 224 aaKnown RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 FZD5Q13467 585 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 ARHGAP29Q52LW3 1261 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 KRT39Q6A163 491 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 TXNDC11Q6PKC3 985 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 ELOA2Q8IYF1 753 aaPredicted RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 SCAMP5Q8TAC9 235 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 NELFBQ8WX92 580 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 FAM3CQ92520 227 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 JAKMIP2Q96AA8 810 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 TNIP3Q96KP6 325 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 C8orf48Q96LL4 319 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 DUSP9Q99956 384 aaKnown RBP14.12□□□□□ -0.15
RNF4-215ENST00000511843 GKN1Q9NS71 199 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 OBP2AQ9NY56 170 aa14.12□□□□□ -0.15
RNF4-215ENST00000511843 TRAV19A0A0A6YYK7 116 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
RNF4-215ENST00000511843 ARSAP15289 507 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 DDX6P26196 483 aaKnown RBP eCLIP14.11□□□□□ -0.15
RNF4-215ENST00000511843 WEE1P30291 646 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 GTF2H1P32780 548 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 STX17P56962 302 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 UBE2HP62256 183 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ENPEPQ07075 957 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 TAF10Q12962 218 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 STIM1Q13586 685 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 MORC3Q14149 939 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ZNF394Q53GI3 561 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 WDR44Q5JSH3 913 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 TTI2Q6NXR4 508 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 FRMD5Q7Z6J6 570 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ZNF687Q8N1G0 1237 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 FBXL13Q8NEE6 735 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ZMIZ2Q8NF64 920 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 WHAMMQ8TF30 809 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 TATDN2Q93075 761 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 DHTKD1Q96HY7 919 aaPredicted RBP14.11□□□□□ -0.15
RNF4-215ENST00000511843 SMOQ99835 787 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 TTLL2Q9BWV7 592 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 TRPV5Q9NQA5 729 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 HPS4Q9NQG7 708 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 RBM12Q9NTZ6 932 aaKnown RBP14.11□□□□□ -0.15
RNF4-215ENST00000511843 SPATA6Q9NWH7 488 aaPredicted RBP14.11□□□□□ -0.15
RNF4-215ENST00000511843 TRPM5Q9NZQ8 1165 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 GCNT4Q9P109 453 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ATP8B3O60423 1300 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 KIAA1549LQ6ZVL6 1849 aa14.11□□□□□ -0.15
RNF4-215ENST00000511843 ZNF840PA6NDX5 716 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 OTOL1A6NHN0 477 aaPredicted RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 SPECC1L-ADORA2AF8WAN1 911 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 MAN2B1O00754 1011 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 SCAMP3O14828 347 aaKnown RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 USP17L7P0C7H9 530 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 HDCP19113 662 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 CTHP32929 405 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 MCCD1P59942 119 aaPredicted RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 ZXDBP98169 803 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 INCA1Q0VD86 236 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 UNC93AQ86WB7 457 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 C1orf210Q8IVY1 113 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 MAML2Q8IZL2 1156 aaPredicted RBP14.1□□□□□ -0.15
RNF4-215ENST00000511843 CRYBG2Q8N1P7 616 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 SH3RF2Q8TEC5 729 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 CLDN23Q96B33 292 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 SMARCD1Q96GM5 515 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 FAM83CQ9BQN1 747 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 OSBPL6Q9BZF3 934 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 RNF38Q9H0F5 515 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 CYP3A43Q9HB55 503 aa14.1□□□□□ -0.15
RNF4-215ENST00000511843 DMAP1Q9NPF5 467 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms