RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 DHCR24Q15392 516 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS4-210ENST00000511708 ECM1Q16610 540 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 BMP2KLQ5H9B9 411 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 SDHAF4Q5VUM1 108 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 ZPBP2Q6X784 338 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
COPS4-210ENST00000511708 CDC6Q99741 560 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
COPS4-210ENST00000511708 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 MYLKQ15746 1914 aa12.91□□□□□ -0.34
COPS4-210ENST00000511708 COL5A1P20908 1838 aaPredicted RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 SLC16A4O15374 487 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 CLDN3O15551 220 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 FAM189A1O60320 539 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 HIP1RO75146 1068 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 ZNF217O75362 1048 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 GNSP15586 552 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 GRIA2P42262 883 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.34
COPS4-210ENST00000511708 STK3Q13188 491 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 PTPRNQ16849 979 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 RUFY3Q7L099 469 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 THEM5Q8N1Q8 247 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 KCNV2Q8TDN2 545 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 LEO1Q8WVC0 666 aaPredicted RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
COPS4-210ENST00000511708 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 PRDM16Q9HAZ2 1276 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 ARHGEF4Q9NR80 690 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 TM7SF3Q9NS93 570 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
COPS4-210ENST00000511708 UBR5O95071 2799 aaPredicted RBP12.89□□□□□ -0.35
COPS4-210ENST00000511708 A0A1B0GTW7 788 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 A0A1W2PQF6 199 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 LEFTY2O00292 366 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 FLRT2O43155 660 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 CILPO75339 1184 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 CDKL5O76039 1030 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 HLA-EP13747 358 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 HDCP19113 662 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 MAOBP27338 520 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 BNC1Q01954 994 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 RESTQ13127 1097 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 KCNB1Q14721 858 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 DDR2Q16832 855 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 GPR155Q7Z3F1 870 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 C17orf75Q9HAS0 396 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 ABCB6Q9NP58 842 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 CYP8B1Q9UNU6 501 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
COPS4-210ENST00000511708 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
COPS4-210ENST00000511708 CYB561D2O14569 222 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 DTNBO60941 627 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 CER1O95813 267 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 HOXB2P14652 356 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 PFKLP17858 780 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 NDUFV2P19404 249 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
COPS4-210ENST00000511708 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
COPS4-210ENST00000511708 KDSRQ06136 332 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 STRN3Q13033 797 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
COPS4-210ENST00000511708 WDR45BQ5MNZ6 344 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 LRRC69Q6ZNQ3 347 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
COPS4-210ENST00000511708 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
COPS4-210ENST00000511708 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 RHBDD1Q8TEB9 315 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 NXPE2Q96DL1 559 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 CD93Q9NPY3 652 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
COPS4-210ENST00000511708 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
COPS4-210ENST00000511708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
COPS4-210ENST00000511708 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
COPS4-210ENST00000511708 PLK4O00444 970 aa12.87□□□□□ -0.35
COPS4-210ENST00000511708 NFICP08651 508 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms