RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZSWIM3Q96MP5 696 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 ASB16Q96NS5 453 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 SMOQ99835 787 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 BPIFA3Q9BQP9 254 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 TTLL2Q9BWV7 592 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 EPHX3Q9H6B9 360 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 TASP1Q9H6P5 420 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 TRPV4Q9HBA0 871 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 CSNK1G1Q9HCP0 422 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 UBE2TQ9NPD8 197 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 KRT82Q9NSB4 513 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 TMEM30AQ9NV96 361 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 COMMD8Q9NX08 183 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 ZMYM5Q9UJ78 669 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 PCDHB4Q9Y5E5 795 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 NUMBLQ9Y6R0 609 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 DENND4AQ7Z401 1863 aa7.58□□□□□ -1.2
PDLIM5-215ENST00000511586 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ECI2O75521 394 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 BEST1O76090 585 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SRFP11831 508 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 CD19P15391 556 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 NPR3P17342 541 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ACO1P21399 889 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 PON1P27169 355 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 WEE1P30291 646 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ZNF165P49910 485 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 MRE11P49959 708 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SLC5A3P53794 718 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SLC8A3P57103 927 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 USP46P62068 366 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 CYP4F8P98187 520 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SIGLEC14Q08ET2 396 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 KRT31Q15323 416 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 FKBP15Q5T1M5 1219 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 STXBP5Q5T5C0 1151 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SMYD5Q6GMV2 418 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 TANGO2Q6ICL3 276 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 POTEHQ6S545 545 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 TMEM270Q6UE05 265 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 MON1AQ86VX9 555 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ARID3BQ8IVW6 561 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 AOPEPQ8N6M6 819 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 UBR7Q8N806 425 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ANKRD52Q8NB46 1076 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ZMIZ2Q8NF64 920 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 ST13P5Q8NFI4 369 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 KAT5Q92993 513 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 E2F7Q96AV8 911 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SLITRK1Q96PX8 696 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 RPP25Q9BUL9 199 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 C1QTNF1Q9BXJ1 281 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 SLC46A2Q9BY10 475 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 DUSP16Q9BY84 665 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 UBXN6Q9BZV1 441 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 VPS16Q9H269 839 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 FBXO44Q9H4M3 255 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 PNPLA8Q9NP80 782 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 TRPM5Q9NZQ8 1165 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 HESX1Q9UBX0 185 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 APEX2Q9UBZ4 518 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 LIMA1Q9UHB6 759 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 DUSP12Q9UNI6 340 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 CNTN6Q9UQ52 1028 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
PDLIM5-215ENST00000511586 TTC28Q96AY4 2481 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 DOCK6Q96HP0 2047 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 MUC3AQ02505 3323 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TRAV19A0A0A6YYK7 116 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 LRRC10BA6NIK2 292 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 BECN2A8MW95 431 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 HHLA1C9JL84 531 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 RNF225M0QZC1 329 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 DPYSL4O14531 572 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TADA3O75528 432 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 CAVIN2O95810 425 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 KRT5P13647 590 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 ZNF18P17022 549 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 PFKLP17858 780 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 FCARP24071 287 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 AVPR1AP37288 418 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 PDE6CP51160 858 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 COPB1P53618 953 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 GPC5P78333 572 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 IFRD2Q12894 506 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TAF10Q12962 218 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 NCAPHQ15003 741 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 STILQ15468 1287 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 CNGA2Q16280 664 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 ARHGAP44Q17R89 818 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TXNDC8Q6A555 127 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 GJB7Q6PEY0 223 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 LRSAM1Q6UWE0 723 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 TRIM67Q6ZTA4 783 aa7.56□□□□□ -1.2
PDLIM5-215ENST00000511586 CLEC20AQ6ZU45 233 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms