RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SMARCB1Q12824 385 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 BRD3Q15059 726 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 LONRF2Q1L5Z9 754 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 KIAA0319Q5VV43 1072 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 CLEC20AQ6ZU45 233 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PAQR9Q6ZVX9 377 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PHLDB2Q86SQ0 1253 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PIGZQ86VD9 579 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 RCOR2Q8IZ40 523 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 DCP1BQ8IZD4 617 aaKnown RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 SCML4Q8N228 414 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 FUBP3Q96I24 572 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PKMYT1Q99640 499 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 RTP3Q9BQQ7 232 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 TRIM62Q9BVG3 475 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 B3GNT5Q9BYG0 378 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 LRRC4Q9HBW1 653 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 HOMER3Q9NSC5 361 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 EFR3BQ9Y2G0 817 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 V9GYY5 206 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 FAM170AA1A519 330 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 CCDC151A5D8V7 595 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 NRP1O14786 923 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 PAPSS1O43252 624 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-209ENST00000511426 HCRTO43612 131 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
SCLT1-209ENST00000511426 PTPN9P43378 593 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 NFE2Q16621 373 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-209ENST00000511426 PTPROQ16827 1216 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 MFSD5Q6N075 450 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 MAATS1Q7Z4T9 603 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 SLC13A5Q86YT5 568 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-209ENST00000511426 ANKZF1Q9H8Y5 726 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 CNGB3Q9NQW8 809 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 KRT82Q9NSB4 513 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 FAN1Q9Y2M0 1017 aa15.98■□□□□ 0.15
SCLT1-209ENST00000511426 TIMM13Q9Y5L4 95 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-209ENST00000511426 MYBPHLA2RUH7 354 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 OR6C75A6NL08 312 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 HSF2BPO75031 334 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 ATP2C2O75185 946 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 AMHP03971 560 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 PYGMP11217 842 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-209ENST00000511426 MARCKSL1P49006 195 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 RGS7P49802 495 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 OGDHQ02218 1023 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
SCLT1-209ENST00000511426 RAB41Q5JT25 222 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 DEFB128Q7Z7B8 93 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 VSIG1Q86XK7 387 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 CCDC26Q8TAB7 109 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 JOSD2Q8TAC2 188 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 DMAP1Q9NPF5 467 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-209ENST00000511426 TMEM51Q9NW97 253 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 PCNTO95613 3336 aa15.97■□□□□ 0.15
SCLT1-209ENST00000511426 TBKBP1A7MCY6 615 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 TULP2O00295 520 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 FSCN2O14926 492 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 B4GALT3O60512 393 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 LRCH4O75427 683 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 ERLIN1O75477 346 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 AP1G2O75843 785 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 DGKIO75912 1065 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 ITGB1P05556 798 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 RAG1P15918 1043 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 PDGFRAP16234 1089 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 IGFBP6P24592 240 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-209ENST00000511426 SDC4P31431 198 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 MRPL58Q14197 206 aaKnown RBP15.96■□□□□ 0.15
SCLT1-209ENST00000511426 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-209ENST00000511426 CYP1B1Q16678 543 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 TCTN1Q2MV58 587 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 ODF2Q5BJF6 829 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 ZNF280DQ6N043 979 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 MTERF4Q7Z6M4 381 aaKnown RBP15.96■□□□□ 0.15
SCLT1-209ENST00000511426 SIX6OS1Q8N1H7 587 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 EIF1ADQ8N9N8 165 aaKnown RBP15.96■□□□□ 0.15
SCLT1-209ENST00000511426 HASPINQ8TF76 798 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 IRGQQ8WZA9 623 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 TOP1MTQ969P6 601 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 MYLPFQ96A32 169 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 TBCBQ99426 244 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 DNAJB4Q9UDY4 337 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 LTBP2Q14767 1821 aa15.96■□□□□ 0.15
SCLT1-209ENST00000511426 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 F8VP50 259 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 H7C4K7 107 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 GJB6O95452 261 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 GALTP07902 379 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 FGFR3P22607 806 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms