RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 VGLL2Q8N8G2 317 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZNF527Q8NB42 609 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 SSH3Q8TE77 659 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ATRIPQ8WXE1 791 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ASB10Q8WXI3 467 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 LPIN2Q92539 896 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 TMEM41AQ96HV5 264 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 SNX27Q96L92 541 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 EIF2AQ9BY44 585 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 WDR11Q9BZH6 1224 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 AMBRA1Q9C0C7 1298 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.06□□□□□ -1.766e-8■■■■■ 46.2
TRAPPC11-207ENST00000511409 DHX36Q9H2U1 1008 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PPCSQ9HAB8 311 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 AS3MTQ9HBK9 375 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC39A10Q9ULF5 831 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 RIPOR2Q9Y4F9 1068 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 A0A087WV62 115 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAM234BA2RU67 622 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 PLEKHD1A6NEE1 506 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 CLCA1A8K7I4 914 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 IFRD1O00458 451 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 CYR61O00622 381 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 FFAR2O15552 330 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 PLA2G6O60733 806 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 TCEA3O75764 348 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 EIF3JO75822 258 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 PDHA1P08559 390 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 ATICP31939 592 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 PDE6CP51160 858 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 ICA1Q05084 483 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZNF750Q32MQ0 723 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 FCRL6Q6DN72 434 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCDC174Q6PII3 467 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 MYCBPAPQ8TBZ2 947 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 OSCP1Q8WVF1 389 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 ATG4AQ8WYN0 398 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 LENG9Q96B70 501 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 FBXL20Q96IG2 436 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 SERHL2Q9H4I8 314 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 DKK2Q9UBU2 259 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 HPSEQ9Y251 543 aa4.05□□□□□ -1.76
TRAPPC11-207ENST00000511409 YY2O15391 372 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 PEX1O43933 1283 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 FZD7O75084 574 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 COQ9O75208 318 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 CSF1RP07333 972 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 RHOP08100 348 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 CHRM2P08172 466 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 C6P13671 934 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 HGFP14210 728 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 ALDH9A1P49189 494 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 MTHFSP49914 203 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 HNRNPMP52272 730 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 HMGA2P52926 109 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 COPAP53621 1224 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 SP2Q02086 613 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 ITIH3Q06033 890 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCNIQ14094 377 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 PUM3Q15397 648 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 PDCD2Q16342 344 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCDC38Q502W7 563 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 CERCAMQ5T4B2 595 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAXCQ5TGI0 409 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 ABHD17BQ5VST6 288 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 USP49Q70CQ1 688 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 KRT28Q7Z3Y7 464 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 MRGPREQ86SM8 312 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 SMC5Q8IY18 1101 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC44A3Q8N4M1 653 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 GLIS1Q8NBF1 620 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 IPO4Q8TEX9 1081 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 C18orf8Q96DM3 657 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 LTV1Q96GA3 475 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZBTB45Q96K62 511 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 Q96MF0 132 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 AIFM2Q9BRQ8 373 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 TTLL2Q9BWV7 592 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 STK33Q9BYT3 514 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 PCDHAC1Q9H158 963 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAM83DQ9H4H8 585 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 MMRN2Q9H8L6 949 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 TM7SF3Q9NS93 570 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 RGL1Q9NZL6 768 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZMYND8Q9ULU4 1186 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 SSX2IPQ9Y2D8 614 aa4.04□□□□□ -1.76
TRAPPC11-207ENST00000511409 A0A087WZ62 844 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 PIPSLA2A3N6 862 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 NPIPB8E9PQR5 432 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 CD3EAPO15446 510 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SNX2O60749 519 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 NBNO60934 754 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SKAP2O75563 359 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 FSHBP01225 129 aa4.03□□□□□ -1.76
TRAPPC11-207ENST00000511409 SRGNP10124 158 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms