RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 GPC5P78333 572 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 ASPHQ12797 758 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 VCPIP1Q96JH7 1222 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 PRDM12Q9H4Q4 367 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 HTR1BP28222 390 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 RAB33AQ14088 237 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 TMEM31Q5JXX7 168 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 C15orf39Q6ZRI6 1047 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC20A1Q8WUM9 679 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 HSPH1Q92598 858 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 DNASE1L2Q92874 299 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 DUS2Q9NX74 493 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 LGALS16A8MUM7 142 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 H7C0C1 242 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 GRM6O15303 877 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 TJP3O95049 919 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 STAU1O95793 577 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 ASS1P00966 412 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 SOX5P35711 763 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 ATP5OP48047 213 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 GPR17Q13304 367 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 ARHGEF18Q6ZSZ5 1173 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 ADSSL1Q8N142 457 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 SYNPOQ8N3V7 929 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 PNPLA8Q9NP80 782 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 A0A0B4J269 797 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ARHGAP6O43182 974 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 GALTP07902 379 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 KRT3P12035 628 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 BLKP51451 505 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CDH8P55286 799 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 FUT2Q10981 343 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 NAA25Q14CX7 972 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 COBLL1Q53SF7 1204 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 TRIM54Q9BYV2 358 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC2A11Q9BYW1 496 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 MARCH2Q9P0N8 246 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 IFNKQ9P0W0 207 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CDH7Q9ULB5 785 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 C9IYK1 514 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 QSOX1O00391 747 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 LCP1P13796 627 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ATP5DP30049 168 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ALDH3A1P30838 453 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC12A3P55017 1021 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 PDK1Q15118 436 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 LHX8Q68G74 356 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC39A11Q8N1S5 342 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CCT6BQ92526 530 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SYN2Q92777 582 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 BAG1Q99933 345 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 OMDQ99983 421 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CIPCQ9C0C6 399 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 WDCPQ9H6R7 721 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CNTN3Q9P232 1028 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 AKAP11Q9UKA4 1901 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 FOXP2O15409 715 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF217O75362 1048 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 IRF1P10914 325 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 NCAM1P13591 858 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 GPD1P21695 349 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 CDC25AP30304 524 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 PAPOLAP51003 745 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF284Q2VY69 593 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 KLHL35Q6PF15 583 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 GDAP1Q8TB36 358 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 P3H4Q92791 437 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 RPRD1AQ96P16 312 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 MTMR12Q9C0I1 747 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 HAUS4Q9H6D7 363 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 MID2Q9UJV3 735 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SCML1Q9UN30 329 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 EML1O00423 815 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 YKT6O15498 198 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 LZTS3O60299 673 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 MYBL2P10244 700 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ATP1A3P13637 1013 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 NPR3P17342 541 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 DRD1P21728 446 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 LRPAP1P30533 357 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 PHBP35232 272 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 TRIM32Q13049 653 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF268Q14587 947 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SHHQ15465 462 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 DAB2IPQ5VWQ8 1189 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ZDHHC20Q5W0Z9 365 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 ATPAF2Q8N5M1 289 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 HEXDCQ8WVB3 486 aa10.11□□□□□ -0.79
POLR2J3-215ENST00000511313 RTN2O75298 545 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms