RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 PLD1Q13393 1074 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 GRM2Q14416 872 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 MDH1BQ5I0G3 518 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 ACOT1Q86TX2 421 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 DCP1BQ8IZD4 617 aaKnown RBP16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 B3GALNT2Q8NCR0 500 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 SPPL2BQ8TCT7 592 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 RSPRY1Q96DX4 576 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 SLC2A4RGQ9NR83 387 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 WNT16Q9UBV4 365 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 PCDHB5Q9Y5E4 795 aa16.52■□□□□ 0.24
SH3TC1-220ENST00000511002 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.23
SH3TC1-220ENST00000511002 EPHB6O15197 1021 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 MICAL2O94851 1124 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 PTPN1P18031 435 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 CYP2F1P24903 491 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 GABRR2P28476 465 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 VIPR2P41587 438 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 CYP4F8P98187 520 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 TCF15Q12870 199 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 DDR2Q16832 855 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 KLHDC7AQ5VTJ3 777 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM171BQ6P995 826 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 ZSCAN18Q8TBC5 510 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 C2orf15Q8WU43 125 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 GANQ9H2C0 597 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 MFSD1Q9H3U5 465 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 IFNKQ9P0W0 207 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 DNAJC12Q9UKB3 198 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 GREB1Q4ZG55 1949 aa16.51■□□□□ 0.23
SH3TC1-220ENST00000511002 MYH10P35580 1976 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ECI2O75521 394 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 NOL4O94818 638 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 HMGA1P17096 107 aaKnown RBP16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 RAD23BP54727 409 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 MFAP3P55082 362 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 UBASH3AP57075 661 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 SMARCB1Q12824 385 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ARHGAP44Q17R89 818 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 VITQ6UXI7 678 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 TMEM150AQ86TG1 271 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 TTC39CQ8N584 583 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 LEMD2Q8NC56 503 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 MYCBPAPQ8TBZ2 947 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 PCED1BQ96HM7 432 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ATXN3LQ9H3M9 355 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM124BQ9H5Z6 455 aaPredicted RBP16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 PLCB1Q9NQ66 1216 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ARHGEF3Q9NR81 526 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 ASB3Q9Y575 518 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 PCDHB4Q9Y5E5 795 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 COL4A2P08572 1712 aa16.5■□□□□ 0.23
SH3TC1-220ENST00000511002 CALCAP01258 141 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 PNMA6AP0CW24 399 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 CCDC130P13994 396 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 PLA2G5P39877 138 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 NR1I3Q14994 352 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 VEPH1Q14D04 833 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 NFE2Q16621 373 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 CRYBG2Q8N1P7 616 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 SLC4A11Q8NBS3 891 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 NUP210Q8TEM1 1887 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 SMARCD2Q92925 531 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 ELSPBP1Q96BH3 223 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 TNIP3Q96KP6 325 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 XPO4Q9C0E2 1151 aaKnown RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 SLITRK6Q9H5Y7 841 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 ZFP14Q9HCL3 533 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 TICRRQ7Z2Z1 1910 aa16.49■□□□□ 0.23
SH3TC1-220ENST00000511002 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 CLDN5O00501 218 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 AP5Z1O43299 807 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 TADA3O75528 432 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 KRT5P13647 590 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 UCHL3P15374 230 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 AOC1P19801 751 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ZNF132P52740 706 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms