RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ACTL7BQ9Y614 415 aa15.52■□□□□ 0.08
USP38-202ENST00000510377 UMODL1Q5DID0 1318 aa15.52■□□□□ 0.08
USP38-202ENST00000510377 RFC1P35251 1148 aaPredicted RBP15.52■□□□□ 0.07
USP38-202ENST00000510377 RPL22P35268 128 aaKnown RBP15.52■□□□□ 0.07
USP38-202ENST00000510377 DNAL1Q4LDG9 190 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 TTC39BQ5VTQ0 682 aaPredicted RBP15.52■□□□□ 0.07
USP38-202ENST00000510377 CLPTM1LQ96KA5 538 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 PACSIN3Q9UKS6 424 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 ADCY3O60266 1144 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 PRKCBP05771 671 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 TCN1P20061 433 aaPredicted RBP15.52■□□□□ 0.07
USP38-202ENST00000510377 ARL4AP40617 200 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 NRLP54845 237 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 CDK16Q00536 496 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 TAP1Q03518 808 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 ART3Q13508 389 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 PGM5Q15124 567 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 STXBP2Q15833 593 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 TTC7BQ86TV6 843 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 ALLCQ8N6M5 410 aa15.52■□□□□ 0.07
USP38-202ENST00000510377 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP38-202ENST00000510377 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 ADSSP30520 456 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 MCL1Q07820 350 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 SGSM1Q2NKQ1 1148 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 ICA1LQ8NDH6 482 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 TXLNGYQ9BZA5 131 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 DNAI2Q9GZS0 605 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 CCDC134Q9H6E4 229 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 PPCSQ9HAB8 311 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 APOL1O14791 398 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 ASMTLO95671 621 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 TPBGLP0DKB5 382 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 DSG1Q02413 1049 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 ANKRD22Q5VYY1 191 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 GADL1Q6ZQY3 521 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 GALNT4Q8N4A0 578 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 OR6B3Q8NGW1 331 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 PYDC1Q8WXC3 89 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 AS3MTQ9HBK9 375 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 SKIV2L2P42285 1042 aaKnown RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 HADHBP55084 474 aaKnown RBP15.51■□□□□ 0.07
USP38-202ENST00000510377 PARP6Q2NL67 630 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 C16orf46Q6P387 395 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 ANO5Q75V66 913 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 UCMAQ8WVF2 138 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 WRNIP1Q96S55 665 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 DNAJC16Q9Y2G8 782 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 COMMD10Q9Y6G5 202 aa15.51■□□□□ 0.07
USP38-202ENST00000510377 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 WDR46O15213 610 aaKnown RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 TM9SF1O15321 606 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 FAM155BO75949 473 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 USP1O94782 785 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 SLC12A2P55011 1212 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 GAD2Q05329 585 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 AP1B1Q10567 949 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 IFRD2Q12894 506 aaPredicted RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 CCNYL1Q8N7R7 359 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 C12orf50Q8NA57 414 aaPredicted RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 PLIN4Q96Q06 1357 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 CREB3O43889 395 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 CYTH1Q15438 398 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 FAF1Q9UNN5 650 aaPredicted RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 C2CD2LO14523 706 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 FDX1P10109 184 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 STAT5BP51692 787 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 MMRN1Q13201 1228 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 ZBTB41Q5SVQ8 909 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 SLC26A11Q86WA9 606 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 UNC45BQ8IWX7 931 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 NMD3Q96D46 503 aaKnown RBP15.5■□□□□ 0.07
USP38-202ENST00000510377 SAR1AQ9NR31 198 aa15.5■□□□□ 0.07
USP38-202ENST00000510377 PEX11AO75192 247 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 KCNA4P22459 653 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 NFIL3Q16649 462 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 TATDN1Q6P1N9 297 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 CEP120Q8N960 986 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 NMUR2Q9GZQ4 415 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 RSAD1Q9HA92 442 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 KIF3CO14782 793 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 ALOX15BO15296 676 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 ENO3P13929 434 aaPredicted RBP15.49■□□□□ 0.07
USP38-202ENST00000510377 ETS2P15036 469 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 SNX16P57768 344 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 DBN1Q16643 649 aa15.49■□□□□ 0.07
USP38-202ENST00000510377 TCHHL1Q5QJ38 904 aaPredicted RBP15.49■□□□□ 0.07
USP38-202ENST00000510377 IRGCQ6NXR0 463 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms