RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	PCDHGB2	Q9Y5G2	931 aa		10.43	□□□□□ -0.74
PTPN20-223	ENST00000509900	NBAS	A2RRP1	2371 aa		10.43	□□□□□ -0.74
PTPN20-223	ENST00000509900	LARGE1	O95461	756 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	GNS	P15586	552 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	GABRG2	P18507	467 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	CDC27	P30260	824 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	IFNAR2	P48551	515 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	YWHAH	Q04917	246 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	CTTN	Q14247	550 aa	Known RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ZNF268	Q14587	947 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ZNF77	Q15935	545 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	HSF5	Q4G112	596 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	C4orf48	Q5BLP8	95 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	EOGT	Q5NDL2	527 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	TXNDC8	Q6A555	127 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	BPHL	Q86WA6	291 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ERICH1	Q86X53	443 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	EFCAB13	Q8IY85	973 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	TBCK	Q8TEA7	893 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	C18orf25	Q96B23	403 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ITPKC	Q96DU7	683 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	TMEM176A	Q96HP8	235 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	ACAP3	Q96P50	834 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	GPRC5C	Q9NQ84	441 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	SLC38A7	Q9NVC3	462 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	BRPF3	Q9ULD4	1205 aa		10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-223	ENST00000509900	MYH10	P35580	1976 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	CER1	O95813	267 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	F11	P03951	625 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	JUP	P14923	745 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	RPL9	P32969	192 aa	Known RBP	10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	MATK	P42679	507 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	KIR2DL1	P43626	348 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	NLRP12	P59046	1061 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	USP4	Q13107	963 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	NR5A1	Q13285	461 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	TMEM132A	Q24JP5	1023 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	HLA-B	Q31612	363 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	DCAF4L1	Q3SXM0	396 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	C4orf17	Q53FE4	359 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	SYNE3	Q6ZMZ3	975 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	TMEM130	Q8N3G9	435 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	CEP120	Q8N960	986 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	BICD2	Q8TD16	824 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	DYDC2	Q96IM9	177 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	NRSN2	Q9GZP1	204 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	CCDC113	Q9H0I3	377 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	LINC00597	Q9H2U6	94 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	CD93	Q9NPY3	652 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	GMIP	Q9P107	970 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900	TCHH	Q07283	1943 aa		10.41	□□□□□ -0.74
PTPN20-223	ENST00000509900		A0A1B0GTW7	788 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	OR6C75	A6NL08	312 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900		M0QZQ0	153 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	ACKR2	O00590	384 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	ZBTB43	O43298	467 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	SLC37A4	O43826	429 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	MAN1A2	O60476	641 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	BRINP1	O60477	761 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	DDX6	P26196	483 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	MARCKS	P29966	332 aa	Predicted RBP	10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	CDR1	P51861	262 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	TMPRSS3	P57727	454 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	FAM160A1	Q05DH4	1040 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	NR1H3	Q13133	447 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	VEPH1	Q14D04	833 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	EPHA7	Q15375	998 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	QPCT	Q16769	361 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	MON1A	Q86VX9	555 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	TTC16	Q8NEE8	873 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	GIPC2	Q8TF65	315 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	SLC22A12	Q96S37	553 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	SLK	Q9H2G2	1235 aa	Predicted RBP	10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	ZSWIM4	Q9H7M6	989 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	HSFX1	Q9UBD0	423 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	CYP8B1	Q9UNU6	501 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	PAXBP1	Q9Y5B6	917 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	RBM8A	Q9Y5S9	174 aa	Known RBP	10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	NUMA1	Q14980	2115 aa		10.4	□□□□□ -0.74
PTPN20-223	ENST00000509900	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	GOLGA8A	A7E2F4	631 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	GOLGA8B	A8MQT2	603 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	KCNE1	P15382	129 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	HMGA1	P17096	107 aa	Known RBP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	CR2	P20023	1033 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	LOR	P23490	312 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	HNF1B	P35680	557 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	SLC6A11	P48066	632 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	NFATC3	Q12968	1075 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	UBAP2L	Q14157	1087 aa	Known RBP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	TBC1D25	Q3MII6	688 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	SYCP2L	Q5T4T6	812 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	ZBTB8OS	Q8IWT0	167 aa		10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	ZCCHC9	Q8N567	271 aa	Known RBP	10.39	□□□□□ -0.75
PTPN20-223	ENST00000509900	SNRNP27	Q8WVK2	155 aa	Known RBP	10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms