RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RBM12Q9NTZ6 932 aaKnown RBP19.11■□□□□ 0.65
TPM3-220ENST00000509601 TRIM66O15016 1216 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 NR2F2P24468 414 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 VAMP7P51809 220 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 NOP14P78316 857 aaKnown RBP19.1■□□□□ 0.65
TPM3-220ENST00000509601 FAM160A1Q05DH4 1040 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 ADAM9Q13443 819 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 PNOCQ13519 176 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 RUNX3Q13761 415 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 PON2Q15165 354 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 SPOPLQ6IQ16 392 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 ARL14EPQ8N8R7 260 aaPredicted RBP19.1■□□□□ 0.65
TPM3-220ENST00000509601 SUMF1Q8NBK3 374 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 ZBTB44Q8NCP5 570 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 EBF3Q9H4W6 596 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 TRPC7Q9HCX4 862 aa19.1■□□□□ 0.65
TPM3-220ENST00000509601 OTOGLQ3ZCN5 2332 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 TRAV19A0A0A6YYK7 116 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ZNF840PA6NDX5 716 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ASS1P00966 412 aaKnown RBP19.09■□□□□ 0.65
TPM3-220ENST00000509601 USP17L7P0C7H9 530 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 HDCP19113 662 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ANXA13P27216 316 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ZXDBP98169 803 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ZC3H14Q6PJT7 736 aaKnown RBP19.09■□□□□ 0.65
TPM3-220ENST00000509601 SMYD4Q8IYR2 804 aaPredicted RBP19.09■□□□□ 0.65
TPM3-220ENST00000509601 TAF4BQ92750 862 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 KCNK16Q96T55 309 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 IER2Q9BTL4 223 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ELOVL4Q9GZR5 314 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ZSCAN32Q9NX65 697 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 ZNF292O60281 2723 aa19.09■□□□□ 0.65
TPM3-220ENST00000509601 KIF26AQ9ULI4 1882 aaPredicted RBP19.09■□□□□ 0.65
TPM3-220ENST00000509601 FRYLO94915 3013 aa19.08■□□□□ 0.65
TPM3-220ENST00000509601 LILRB5O75023 590 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 HLA-DRAP01903 254 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 ARSAP15289 507 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 PSMC2P35998 433 aaKnown RBP19.08■□□□□ 0.64
TPM3-220ENST00000509601 GCLMP48507 274 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 ENPEPQ07075 957 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 CCINQ13939 588 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 ZNF77Q15935 545 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 DGKKQ5KSL6 1271 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 SCARA5Q6ZMJ2 495 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 INTS8Q75QN2 995 aaKnown RBP19.08■□□□□ 0.64
TPM3-220ENST00000509601 CRYBG2Q8N1P7 616 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 RNF38Q9H0F5 515 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 APOBEC3GQ9HC16 384 aaKnown RBP19.08■□□□□ 0.64
TPM3-220ENST00000509601 TRPM5Q9NZQ8 1165 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 PCDHGA2Q9Y5H1 932 aa19.08■□□□□ 0.64
TPM3-220ENST00000509601 SPTBN4Q9H254 2564 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TNFRSF10BO14763 440 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 CKMP06732 381 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TRIM49P0CI25 452 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TRIM49CP0CI26 452 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TCF3P15923 654 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 RPL13P26373 211 aaKnown RBP19.07■□□□□ 0.64
TPM3-220ENST00000509601 ASPAP45381 313 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 CXCL12P48061 93 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 SATB1Q01826 763 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TAF10Q12962 218 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 LRRC32Q14392 662 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 MTF1Q14872 753 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 CC2D1AQ6P1N0 951 aaPredicted RBP19.07■□□□□ 0.64
TPM3-220ENST00000509601 Q6ZS52 159 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 ACOT1Q86TX2 421 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 FAM186BQ8IYM0 893 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 NUP93Q8N1F7 819 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 SPEM1Q8N4L4 309 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 SPATA20Q8TB22 786 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TAS1R2Q8TE23 839 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 SH3RF2Q8TEC5 729 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 OSCP1Q8WVF1 389 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 ATRIPQ8WXE1 791 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TNIP3Q96KP6 325 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 LINC00597Q9H2U6 94 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 FBRSL1Q9HCM7 1045 aaKnown RBP19.07■□□□□ 0.64
TPM3-220ENST00000509601 C2orf42Q9NWW7 574 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 IL37Q9NZH6 218 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 ARHGAP26Q9UNA1 814 aa19.07■□□□□ 0.64
TPM3-220ENST00000509601 TRDMT1O14717 391 aaKnown RBP19.06■□□□□ 0.64
TPM3-220ENST00000509601 P4HA1P13674 534 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 PFKLP17858 780 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 PRCPP42785 496 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 PPP3CCP48454 512 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 CCR3P51677 355 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 NDST1P52848 882 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 USP4Q13107 963 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 PDGFRLQ15198 375 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 EDRF1Q3B7T1 1238 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 TMEM196Q5HYL7 178 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 FSTL4Q6MZW2 842 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 UNC93AQ86WB7 457 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 FUKQ8N0W3 1084 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 SYNPOQ8N3V7 929 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
TPM3-220ENST00000509601 EEF2KMTQ96G04 330 aa19.06■□□□□ 0.64
TPM3-220ENST00000509601 FAM126AQ9BYI3 521 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms