RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ATICP31939 592 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 GJA4P35212 333 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 PXNP49023 591 aaPredicted RBP16.41■□□□□ 0.22
TPM3-219ENST00000509409 EHHADHQ08426 723 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 PSMD2Q13200 908 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 BIRC3Q13489 604 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 ZNF77Q15935 545 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
TPM3-219ENST00000509409 PKN3Q6P5Z2 889 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
TPM3-219ENST00000509409 CHFRQ96EP1 664 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 CEP295NLQ96MC4 621 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 LINC00597Q9H2U6 94 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 FBRSL1Q9HCM7 1045 aaKnown RBP16.41■□□□□ 0.22
TPM3-219ENST00000509409 PARD6AQ9NPB6 346 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 GCNT4Q9P109 453 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
TPM3-219ENST00000509409 F8VP50 259 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 RNF40O75150 1001 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 TGM1P22735 817 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 HOXA6P31267 233 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 CASP4P49662 377 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 ATXN1P54253 815 aaKnown RBP16.4■□□□□ 0.22
TPM3-219ENST00000509409 USP46P62068 366 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 IFRD2Q12894 506 aaPredicted RBP16.4■□□□□ 0.22
TPM3-219ENST00000509409 PKP1Q13835 747 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 BMT2Q1RMZ1 405 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 C12orf56Q8IXR9 622 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 CD101Q93033 1021 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 C8orf48Q96LL4 319 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 DPEP3Q9H4B8 488 aa16.4■□□□□ 0.22
TPM3-219ENST00000509409 DCHS1Q96JQ0 3298 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 CLDN5O00501 218 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 AXIN1O15169 862 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 PPP3CCP48454 512 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 USP4Q13107 963 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 EML3Q32P44 896 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 FBXO43Q4G163 708 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 NAIF1Q69YI7 327 aaPredicted RBP16.39■□□□□ 0.21
TPM3-219ENST00000509409 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
TPM3-219ENST00000509409 NUP210Q8TEM1 1887 aaPredicted RBP16.39■□□□□ 0.21
TPM3-219ENST00000509409 DMXL1Q9Y485 3027 aa16.39■□□□□ 0.21
TPM3-219ENST00000509409 A0A1B0GVL5 298 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 ZNF840PA6NDX5 716 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 LEFTY2O00292 366 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 LRP3O75074 770 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 NFATC1O95644 943 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
TPM3-219ENST00000509409 PFKLP17858 780 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 AP3M2P53677 418 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 CDH8P55286 799 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 TAF10Q12962 218 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 STK4Q13043 487 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 ZNF699Q32M78 642 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 FAM160A2Q8N612 972 aaPredicted RBP16.38■□□□□ 0.21
TPM3-219ENST00000509409 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 RPLP0P6Q8NHW5 317 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 SLITRK1Q96PX8 696 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 TTLL2Q9BWV7 592 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 ELOVL4Q9GZR5 314 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 SEMA4GQ9NTN9 838 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
TPM3-219ENST00000509409 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
TPM3-219ENST00000509409 DCDC2BA2VCK2 349 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
TPM3-219ENST00000509409 ACTN4O43707 911 aaKnown RBP16.37■□□□□ 0.21
TPM3-219ENST00000509409 KLRC4O43908 158 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 RPP40O75818 363 aaKnown RBP16.37■□□□□ 0.21
TPM3-219ENST00000509409 TCF3P15923 654 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
TPM3-219ENST00000509409 NCOA4Q13772 614 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 SCARA5Q6ZMJ2 495 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 CAMKK1Q8N5S9 505 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 PLEKHO2Q8TD55 490 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 PARD3BQ8TEW8 1205 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 HHIPQ96QV1 700 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 RTKNQ9BST9 563 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 RNF38Q9H0F5 515 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 GZF1Q9H116 711 aaPredicted RBP16.37■□□□□ 0.21
TPM3-219ENST00000509409 XYLT2Q9H1B5 865 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 SMYD3Q9H7B4 428 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 SMPD4Q9NXE4 827 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 CPQQ9Y646 472 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 ATP8B3O60423 1300 aa16.37■□□□□ 0.21
TPM3-219ENST00000509409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.36■□□□□ 0.21
TPM3-219ENST00000509409 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms