RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 USP18Q9UMW8 372 aa9.39□□□□□ -0.91
COL4A3BP-206ENST00000508809 NDRG2Q9UN36 371 aaKnown RBP9.39□□□□□ -0.91
COL4A3BP-206ENST00000508809 ATG2BQ96BY7 2078 aa9.39□□□□□ -0.91
COL4A3BP-206ENST00000508809 NCANO14594 1321 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 M0QZQ0 153 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 SLC30A4O14863 429 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZNF263O14978 683 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 OAZ2O95190 189 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 CNR2P34972 360 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 CCT6AP40227 531 aaKnown RBP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 VIPR2P41587 438 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ARPP19P56211 112 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 PEX3P56589 373 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 OSTNP61366 133 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ST3GAL1Q11201 340 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 TWF1Q12792 350 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 SAFBQ15424 915 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 SLC10A6Q3KNW5 377 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 CTXN3Q4LDR2 81 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZSCAN18Q8TBC5 510 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 TP53INP1Q96A56 240 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 MSANTD3Q96H12 275 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 BHLHE41Q9C0J9 482 aaPredicted RBP9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 PIAS3Q9Y6X2 628 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
COL4A3BP-206ENST00000508809 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 K7ESF4 209 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 CHADO15335 359 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 VNN2O95498 520 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 CCNE1P24864 410 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 NOS3P29474 1203 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 HOXA6P31267 233 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 SATB1Q01826 763 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 MAPK7Q13164 816 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 DMP1Q13316 513 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 TEAD2Q15562 447 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZBTB6Q15916 424 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 CSRP2Q16527 193 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 C1orf186Q6ZWK4 172 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 ACAD11Q709F0 780 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 TMC8Q8IU68 726 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 RSPRY1Q96DX4 576 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZBTB45Q96K62 511 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 HHIPQ96QV1 700 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 C8orf33Q9H7E9 229 aaPredicted RBP9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 ASAH2Q9NR71 780 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 SEMA4GQ9NTN9 838 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 DDX19AQ9NUU7 478 aaKnown RBP9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 LRWD1Q9UFC0 647 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.37□□□□□ -0.91
COL4A3BP-206ENST00000508809 MYBPHLA2RUH7 354 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 FOXD2O60548 495 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 HIP1RO75146 1068 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 MYL4P12829 197 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 GJA1P17302 382 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 CYP3A5P20815 502 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 MAPK1P28482 360 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 LRPAP1P30533 357 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 C19orf57Q0VDD7 668 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 GPR17Q13304 367 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 SIM2Q14190 667 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 LPAL2Q16609 132 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 DUOXA2Q1HG44 320 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 DGKKQ5KSL6 1271 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 TTC38Q5R3I4 469 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 RINT1Q6NUQ1 792 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 GALNT11Q8NCW6 608 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 KCNN1Q92952 543 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 DRC1Q96MC2 740 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 LRRC3BQ96PB8 259 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms