RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TRIB2Q92519 343 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 USP6NLQ92738 828 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 WWC2-AS2Q96NR7 200 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 STRBPQ96SI9 672 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 ACE2Q9BYF1 805 aaPredicted RBP4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 PORCNQ9H237 461 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 MKS1Q9NXB0 559 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 SWAP70Q9UH65 585 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 RABGAP1Q9Y3P9 1069 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 SLC4A4Q9Y6R1 1079 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 TTC41PQ6P2S7 1318 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 SALL3Q9BXA9 1300 aa4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 MKI67P46013 3256 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-226ENST00000508635 H0YGN5 161 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MPHOSPH10O00566 681 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 XPOTO43592 962 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 STC2O76061 302 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CFBP00751 764 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 TFRCP02786 760 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ZFYP08048 801 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 LTA4HP09960 611 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MTHFD2P13995 350 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CAPN2P17655 700 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 NCLP19338 710 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MX1P20591 662 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 COMTP21964 271 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CTSSP25774 331 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 RGS2P41220 211 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MAGEA10P43363 369 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 NPEPPSP55786 919 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 IGBP1P78318 339 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CCNA1P78396 465 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ICA1Q05084 483 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 COG2Q14746 738 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 PCBP2Q15366 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 FAM214AQ32MH5 1076 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 GAGE13Q4V321 117 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 SBK1Q52WX2 424 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 BRDTQ58F21 947 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 KIAA1755Q5JYT7 1200 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MAP3K21Q5TCX8 1036 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ANKRD45Q5TZF3 282 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 GPR142Q7Z601 462 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 SGMS1Q86VZ5 419 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CHD1LQ86WJ1 897 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 RPUSD2Q8IZ73 545 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 D2HGDHQ8N465 521 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 C1orf162Q8NEQ5 155 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 SOCS4Q8WXH5 440 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 RIN2Q8WYP3 895 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 LPAR1Q92633 364 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ARL8AQ96BM9 186 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 FAXDC2Q96IV6 333 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CCDC17Q96LX7 622 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 DEFB118Q96PH6 123 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ADOQ96SZ5 270 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 TCF25Q9BQ70 676 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 PAGR1Q9BTK6 254 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 EPC1Q9H2F5 836 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 RPAP3Q9H6T3 665 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 CD248Q9HCU0 757 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 DMRT3Q9NQL9 472 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 HOXC10Q9NYD6 342 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ARPP21Q9UBL0 812 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 ADAMTS5Q9UNA0 930 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 SH3BP1Q9Y3L3 701 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 TCAF1Q9Y4C2 921 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 PCDHGA2Q9Y5H1 932 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 GPR45Q9Y5Y3 372 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 RPTORQ8N122 1335 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MGAMO43451 1857 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 NAV1Q8NEY1 1877 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 MYH1P12882 1939 aa4.11□□□□□ -1.75
UBE2D3-226ENST00000508635 SLC15A5A6NIM6 579 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 ERC2O15083 957 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 GPAA1O43292 621 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 STRNO43815 780 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 AKR1B10O60218 316 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 HOXC6P09630 235 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 EEF2P13639 858 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 GSPT1P15170 499 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 GNAT2P19087 354 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 ACO1P21399 889 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 AGXTP21549 392 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 MTNR1BP49286 362 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 SLC5A3P53794 718 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 PDE1AP54750 535 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 IRX6P78412 446 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 DUSP2Q05923 314 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 ADRM1Q16186 407 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 CCL14Q16627 93 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 PTPN21Q16825 1174 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 INAVAQ3KP66 663 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 HS1BP3Q53T59 392 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 FAM111BQ6SJ93 734 aa4.1□□□□□ -1.75
UBE2D3-226ENST00000508635 BTNL9Q6UXG8 535 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms