RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, human

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-223	ENST00000508608	PRKCB	P05771	671 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	DHRS4L1	P0CG22	281 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	RBP3	P10745	1247 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	PTPRA	P18433	802 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	PAX7	P23759	505 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	RPS12	P25398	132 aa	Known RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	ZNF200	P98182	395 aa	Predicted RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	ROR1	Q01973	937 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	IER5	Q5VY09	327 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	UNC45B	Q8IWX7	931 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	LMNTD2	Q8IXW0	634 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	ARFGAP1	Q8N6T3	406 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	FAM71D	Q8N9W8	422 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	RFWD2	Q8NHY2	731 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	SLC44A1	Q8WWI5	657 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	C2orf40	Q9H1Z8	148 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	METTL5	Q9NRN9	209 aa	Known RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	CHMP2B	Q9UQN3	213 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	MGAM	O43451	1857 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	GOLGA8R	I6L899	631 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	HOXC6	P09630	235 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	NEFH	P12036	1026 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	GM2A	P17900	193 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	STAT5B	P51692	787 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	NEK3	P51956	506 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	CDK16	Q00536	496 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	DPYSL3	Q14195	570 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	MXD4	Q14582	209 aa	Predicted RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	PLEKHG4	Q58EX7	1191 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	SCARA3	Q6AZY7	606 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	EXOC8	Q8IYI6	725 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	CMAS	Q8NFW8	434 aa	Predicted RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	SPATA18	Q8TC71	538 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	MICAL1	Q8TDZ2	1067 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	JDP2	Q8WYK2	163 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	FAXDC2	Q96IV6	333 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	BTBD10	Q9BSF8	475 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	XYLT2	Q9H1B5	865 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.64	□□□□□ -0.23
CAST-223	ENST00000508608	STK32B	Q9NY57	414 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	STOML1	Q9UBI4	398 aa		13.64	□□□□□ -0.23
CAST-223	ENST00000508608	TCRBV7S3A2	A0A539	114 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ABLIM1	O14639	778 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	B4GALT4	O60513	344 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ATP6V1C1	P21283	382 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	UBA1	P22314	1058 aa	Known RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	PSMC4	P43686	418 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ZBTB16	Q05516	673 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	SLC18A2	Q05940	514 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	OVGP1	Q12889	678 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	FAM47C	Q5HY64	1035 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CCDC62	Q6P9F0	684 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	C4orf50	Q6ZRC1	276 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CATSPERG	Q6ZRH7	1159 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	XYLT1	Q86Y38	959 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CHST13	Q8NET6	341 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	SPDL1	Q96EA4	605 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	NSL1	Q96IY1	281 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CALN1	Q9BXU9	219 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	IQCG	Q9H095	443 aa	Known RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	C10orf88	Q9H8K7	445 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ASNSD1	Q9NWL6	643 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	HOXC10	Q9NYD6	342 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	KANSL3	Q9P2N6	904 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	HEY2	Q9UBP5	337 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ZNF112	Q9UJU3	913 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	POLI	Q9UNA4	740 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	TCRBV9S1A1T	A0A576	114 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	TTLL13P	A6NNM8	815 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CHAD	O15335	359 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	NEBL	O76041	1014 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	FARP2	O94887	1054 aa	Predicted RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	CD48	P09326	243 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	RXRB	P28702	533 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ELK3	P41970	407 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	TFDP2	Q14188	446 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	KRT72	Q14CN4	511 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	PRKD1	Q15139	912 aa	Predicted RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	ZNF667	Q5HYK9	610 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	DARS2	Q6PI48	645 aa	Known RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	MPZL3	Q6UWV2	235 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	TRIM42	Q8IWZ5	723 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	HSPH1	Q92598	858 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	APBB2	Q92870	758 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	SKA1	Q96BD8	255 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	PTCD3	Q96EY7	689 aa	Known RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	WRNIP1	Q96S55	665 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	KLF6	Q99612	283 aa	Predicted RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	TMEM120A	Q9BXJ8	343 aa		13.63	□□□□□ -0.23
CAST-223	ENST00000508608	NXF1	Q9UBU9	619 aa	Known RBP	13.63	□□□□□ -0.23
CAST-223	ENST00000508608	KBTBD13	C9JR72	458 aa		13.62	□□□□□ -0.23
CAST-223	ENST00000508608	KLF11	O14901	512 aa		13.62	□□□□□ -0.23
CAST-223	ENST00000508608	ECM2	O94769	699 aa	Predicted RBP	13.62	□□□□□ -0.23
CAST-223	ENST00000508608	TRUB2	O95900	331 aa	Known RBP	13.62	□□□□□ -0.23
CAST-223	ENST00000508608	ACADS	P16219	412 aa		13.62	□□□□□ -0.23
CAST-223	ENST00000508608	DPEP1	P16444	411 aa		13.62	□□□□□ -0.23
CAST-223	ENST00000508608	MIP	P30301	263 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms