RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 CYP2W1Q8TAV3 490 aa5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 JDP2Q8WYK2 163 aa5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 ZNF778Q96MU6 729 aa5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 LENG8Q96PV6 779 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 SH2D3AQ9BRG2 576 aa5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-225ENST00000508476 CFAP69A5D8W1 941 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 NPSP0C0P6 89 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 XRCC6P12956 609 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 PRKAG1P54619 331 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 SUMO3P55854 103 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 TPTEP56180 551 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 SATB1Q01826 763 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 SRSF7Q16629 238 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 ZNF804AQ7Z570 1209 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 CAND1Q86VP6 1230 aaKnown RBP5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 MICU3Q86XE3 530 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 IZUMO1Q8IYV9 350 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 MAGEB6Q8N7X4 407 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 RP9Q8TA86 221 aaKnown RBP5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 PPP2R3CQ969Q6 453 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 FLRT1Q9NZU1 646 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 GABRQQ9UN88 632 aa5.73□□□□□ -1.49
UBE2D3-225ENST00000508476 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 CYP2D6P10635 497 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 FPR3P25089 353 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 RAB32Q13637 225 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 MINDY4Q4G0A6 757 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 ARHGAP29Q52LW3 1261 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 L1TD1Q5T7N2 865 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 KCTD20Q7Z5Y7 419 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 CHSY1Q86X52 802 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 TCEAL8Q8IYN2 117 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 C17orf80Q9BSJ5 609 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 THAP7Q9BT49 309 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 SACM1LQ9NTJ5 587 aa5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 G3BP2Q9UN86 482 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-225ENST00000508476 PRRT4C9JH25 899 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 AP4M1O00189 453 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 TJP3O95049 919 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 PRR35P0CG20 571 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF81P51508 661 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 TUBA4AP68366 448 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 E2F1Q01094 437 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 MLC1Q15049 377 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 C3orf38Q5JPI3 329 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 CEP78Q5JTW2 689 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 PAPD7Q5XG87 772 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 FCRL6Q6DN72 434 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 KIRREL2Q6UWL6 708 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 DNAJB14Q8TBM8 379 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 PUS7Q96PZ0 661 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 PRR25Q96S07 402 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 QTRT1Q9BXR0 403 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF518BQ9C0D4 1074 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 C1orf112Q9NSG2 853 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF70Q9UC06 446 aaPredicted RBP5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 SHROOM4Q9ULL8 1493 aa5.71□□□□□ -1.5
UBE2D3-225ENST00000508476 EXOC3O60645 756 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 BRAFP15056 766 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 EPHB2P29323 1055 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 EZH2Q15910 746 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 SUPT20HL1Q3ZLR7 823 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 SLC44A4Q53GD3 710 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 MTX3Q5HYI7 312 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 LRCH2Q5VUJ6 765 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF626Q68DY1 528 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 TRIM72Q6ZMU5 477 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 C1QL2Q7Z5L3 287 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 GLCCI1Q86VQ1 547 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 PNLDC1Q8NA58 520 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 ABHD11Q8NFV4 315 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 TSR2Q969E8 191 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 RITA1Q96K30 269 aa5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 DPCDQ9BVM2 203 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 TRMT13Q9NUP7 481 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-225ENST00000508476 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 H7C4K7 107 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 TSPAN6O43657 245 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 ITGA8P53708 1063 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 SSBP2P81877 361 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 PSG6Q00889 435 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 GRM3Q14832 879 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 RNASE12Q5GAN4 147 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 YTHDF3Q7Z739 585 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 TERB1Q8NA31 727 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 FAM156AQ8NDB6 213 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 BHMT2Q9H2M3 363 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 ZSCAN32Q9NX65 697 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 DNMT3BQ9UBC3 853 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 LPAR3Q9UBY5 353 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 TPCN1Q9ULQ1 816 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 CDY1Q9Y6F8 540 aa5.69□□□□□ -1.5
UBE2D3-225ENST00000508476 PYCARD-AS1I3L0S3 204 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms