RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 KRT87PA6NCN2 255 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 PITPNM1O00562 1244 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RRP8O43159 456 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 DCXO43602 365 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 DYRK3O43781 588 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ASGR2P07307 311 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KRT15P19012 456 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 BDNFP23560 247 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 NSFP46459 744 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CAPZA2P47755 286 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 UBE2HP62256 183 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 DEFB103AP81534 67 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 APBA1Q02410 837 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GABPB1Q06547 395 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 FOXC1Q12948 553 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 PAK1Q13153 545 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF177Q13360 481 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ADAM9Q13443 819 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SLC9A5Q14940 896 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF394Q53GI3 561 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SH2D4BQ5SQS7 431 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 C9orf50Q5SZB4 431 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ADCK2Q7Z695 626 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ECHDC2Q86YB7 292 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC105Q8IYK2 499 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 FAM3CQ92520 227 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CD101Q93033 1021 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 PPP1R16AQ96I34 528 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RILPQ96NA2 401 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SELENONQ9NZV5 590 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CTAGE15A4D2H0 777 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 E9PMD0 336 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ERN1O75460 977 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 EYA4O95677 639 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 C8AP07357 584 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CTAGE8P0CG41 777 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CDK17Q00537 523 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RPL6Q02878 288 aaKnown RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KLHL30Q0D2K2 578 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 AP1B1Q10567 949 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KCNH2Q12809 1159 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ORC2Q13416 577 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 POLD3Q15054 466 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CNGA3Q16281 694 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SEZ6Q53EL9 994 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 WDR45BQ5MNZ6 344 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RABGAP1LQ5R372 815 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 TMEM240Q5SV17 173 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 FYB2Q5VWT5 728 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 PTAR1Q7Z6K3 402 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CTAGE6Q86UF2 777 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 C11orf74Q86VG3 221 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CTAGE4Q8IX94 777 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 KIAA2013Q8IYS2 634 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GPR152Q8TDT2 470 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SDCCAG3Q96C92 435 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 HVCN1Q96D96 273 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RBSNQ9H1K0 784 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RNPEPQ9H4A4 650 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 ZSWIM6Q9HCJ5 1215 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 POLD4Q9HCU8 107 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 AVENQ9NQS1 362 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-208ENST00000508342 RAD18Q9NS91 495 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 STK17AQ9UEE5 414 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 GUCA1BQ9UMX6 200 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 SLC30A1Q9Y6M5 507 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 CNTNAP5Q8WYK1 1306 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 STK36Q9NRP7 1315 aa3.09□□□□□ -1.91
NEDD4-208ENST00000508342 POLR3GO15318 223 aaPredicted RBP3.09□□□□□ -1.92
NEDD4-208ENST00000508342 HMGB3O15347 200 aaKnown RBP3.09□□□□□ -1.92
NEDD4-208ENST00000508342 TEX33O43247 280 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 ATP9BO43861 1147 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 GSPT1P15170 499 aaKnown RBP3.09□□□□□ -1.92
NEDD4-208ENST00000508342 TKTP29401 623 aaKnown RBP3.09□□□□□ -1.92
NEDD4-208ENST00000508342 PSMD8P48556 350 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 ME3Q16798 604 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 FBXO47Q5MNV8 452 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 FRA10AC1Q70Z53 315 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 KDELC2Q7Z4H8 507 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 RFX6Q8HWS3 928 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 APLFQ8IW19 511 aaPredicted RBP3.09□□□□□ -1.92
NEDD4-208ENST00000508342 PLPP6Q8IY26 295 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 C10orf67Q8IYJ2 551 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 FAM186BQ8IYM0 893 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 UBALD2Q8IYN6 164 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 NRSN1Q8IZ57 195 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 SYCE1Q8N0S2 351 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 ATP11CQ8NB49 1132 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 ATL2Q8NHH9 583 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 BAP1Q92560 729 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 MAP4K1Q92918 833 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 MAGEB5Q9BZ81 275 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 FBXO44Q9H4M3 255 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 MAGEF1Q9HAY2 307 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 FANCEQ9HB96 536 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 RGS18Q9NS28 235 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 SENP1Q9P0U3 644 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 ITGA11Q9UKX5 1188 aa3.09□□□□□ -1.92
NEDD4-208ENST00000508342 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms