RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ZBTB44Q8NCP5 570 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 C2orf42Q9NWW7 574 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 GCNT4Q9P109 453 aa15.22■□□□□ 0.03
RAB28-205ENST00000508274 TRAV19A0A0A6YYK7 116 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 TRIM66O15016 1216 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 CALUO43852 315 aaPredicted RBP15.21■□□□□ 0.03
RAB28-205ENST00000508274 FAM163BP0C2L3 166 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 TDGF1P13385 188 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 HOXC13P31276 330 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 AP3M2P53677 418 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 SATB1Q01826 763 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 FAM160A1Q05DH4 1040 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 USP4Q13107 963 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 RUNX3Q13761 415 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 MTF1Q14872 753 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 ZNF77Q15935 545 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 SV2AQ7L0J3 742 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 SMYD4Q8IYR2 804 aaPredicted RBP15.21■□□□□ 0.03
RAB28-205ENST00000508274 SUMF1Q8NBK3 374 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 NELL1Q92832 810 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
RAB28-205ENST00000508274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.032e-6■■■■■ 113.8
RAB28-205ENST00000508274 ZSCAN32Q9NX65 697 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 PCDHGA2Q9Y5H1 932 aa15.21■□□□□ 0.03
RAB28-205ENST00000508274 MYO16Q9Y6X6 1858 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 SOBPA7XYQ1 873 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 AKAP3O75969 853 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 NR2F2P24468 414 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 CCR3P51677 355 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 ZXDBP98169 803 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
RAB28-205ENST00000508274 ORC1Q13415 861 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 CCINQ13939 588 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 KCNB1Q14721 858 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
RAB28-205ENST00000508274 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
RAB28-205ENST00000508274 DCLK2Q8N568 766 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 IER2Q9BTL4 223 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 TTLL2Q9BWV7 592 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 ELOVL4Q9GZR5 314 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 WNT6Q9Y6F9 365 aa15.2■□□□□ 0.02
RAB28-205ENST00000508274 LILRB5O75023 590 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 USP17L7P0C7H9 530 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 HDCP19113 662 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 VAMP7P51809 220 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
RAB28-205ENST00000508274 PNOCQ13519 176 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 LRRC32Q14392 662 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 ZCWPW2Q504Y3 356 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 MAMSTRQ6ZN01 415 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 FAM35AQ86V20 835 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
RAB28-205ENST00000508274 ATRIPQ8WXE1 791 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 KCNK16Q96T55 309 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 DNAH14Q0VDD8 3507 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 KIF20AO95235 890 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 PIK3CAP42336 1068 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 ASPAP45381 313 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 DMWDQ09019 674 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 BECN1Q14457 450 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 NFIL3Q16649 462 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 DGKKQ5KSL6 1271 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 PAQR9Q6ZVX9 377 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 ACOT1Q86TX2 421 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 FMR1NBQ8N0W7 255 aaPredicted RBP15.19■□□□□ 0.02
RAB28-205ENST00000508274 SPEM1Q8N4L4 309 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 SH3RF2Q8TEC5 729 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 CEP295NLQ96MC4 621 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 MMRN2Q9H8L6 949 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 DUS2Q9NX74 493 aaKnown RBP15.19■□□□□ 0.02
RAB28-205ENST00000508274 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
RAB28-205ENST00000508274 KIAA1549LQ6ZVL6 1849 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 ZNF840PA6NDX5 716 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 IKBKBO14920 756 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 ABL1P00519 1130 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
RAB28-205ENST00000508274 CXCL12P48061 93 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 GCLMP48507 274 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 NDST1P52848 882 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 PPP3CAQ08209 521 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 TAF10Q12962 218 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 SGSM1Q2NKQ1 1148 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 FAM186BQ8IYM0 893 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
RAB28-205ENST00000508274 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
RAB28-205ENST00000508274 RNF38Q9H0F5 515 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms