RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 GZMAP12544 262 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 MAGEA11P43364 429 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 PLA2G4AP47712 749 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 RGS7P49802 495 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 CLCN4P51793 760 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 PDCLQ13371 301 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 GRIN2CQ14957 1233 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 MGAT5BQ3V5L5 792 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 PTPN20Q4JDL3 420 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 SDHAF4Q5VUM1 108 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 ACAD10Q6JQN1 1059 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 ALKBH5Q6P6C2 394 aaKnown RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 TOGARAM2Q6ZUX3 1019 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 PIGZQ86VD9 579 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 SCN4BQ8IWT1 228 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 ACRBPQ8NEB7 543 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 EIF3CQ99613 913 aaKnown RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 SEPT5Q99719 369 aaPredicted RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 DESI2Q9BSY9 194 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 PRDM12Q9H4Q4 367 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 DMAP1Q9NPF5 467 aaPredicted RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 FBXW11Q9UKB1 542 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 REXO2Q9Y3B8 237 aaKnown RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 CEP83Q9Y592 693 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.99□□□□□ -0.01
RNF4-208ENST00000507247 PER2O15055 1255 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 GRIK1P39086 918 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 PTP4A2Q12974 167 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 PTPROQ16827 1216 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 DDR2Q16832 855 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 C2CD6Q53TS8 623 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 VSTM1Q6UX27 236 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 GPRIN1Q7Z2K8 1008 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 RBM23Q86U06 439 aaKnown RBP14.98□□□□□ -0.01
RNF4-208ENST00000507247 STKLD1Q8NE28 680 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 SLC22A17Q8WUG5 538 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 SLC4A5Q9BY07 1137 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 PACSIN1Q9BY11 444 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 ISCUQ9H1K1 167 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 CYP4F11Q9HBI6 524 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 CHD9Q3L8U1 2897 aa14.98□□□□□ -0.01
RNF4-208ENST00000507247 PIK3R2O00459 728 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 TRIM66O15016 1216 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 NRDCO43847 1150 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 RTN2O75298 545 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 GLUD1P00367 558 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 FTLP02792 175 aaPredicted RBP14.97□□□□□ -0.01
RNF4-208ENST00000507247 ERBB2P04626 1255 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 EPCAMP16422 314 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 ATF6P18850 670 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 DEKP35659 375 aaKnown RBP14.97□□□□□ -0.01
RNF4-208ENST00000507247 NSFP46459 744 aaKnown RBP14.97□□□□□ -0.01
RNF4-208ENST00000507247 RPL34P49207 117 aaKnown RBP14.97□□□□□ -0.01
RNF4-208ENST00000507247 DUSP6Q16828 381 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 PHF13Q86YI8 300 aaPredicted RBP14.97□□□□□ -0.01
RNF4-208ENST00000507247 TCEAL8Q8IYN2 117 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 KREMEN2Q8NCW0 462 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 STK32AQ8WU08 396 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 PPP1R13BQ96KQ4 1090 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 C8orf48Q96LL4 319 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 C11orf70Q9BRQ4 267 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 HSFX1Q9UBD0 423 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 YIPF1Q9Y548 306 aa14.97□□□□□ -0.01
RNF4-208ENST00000507247 A0A0U1RQJ8 604 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 E5RJQ4 531 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 PRRG1O14668 218 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 TNFRSF10BO14763 440 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 MMP8P22894 467 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ELF1P32519 619 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 GTF2F1P35269 517 aaKnown RBP eCLIP14.96□□□□□ -0.019e-9■■■■■ 35.7
RNF4-208ENST00000507247 NRIP1P48552 1158 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 TUFMP49411 452 aaKnown RBP14.96□□□□□ -0.01
RNF4-208ENST00000507247 SLC8A3P57103 927 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 RBM10P98175 930 aaKnown RBP14.96□□□□□ -0.01
RNF4-208ENST00000507247 RAB41Q5JT25 222 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 CYP4A22Q5TCH4 519 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ZNF697Q5TEC3 545 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 GPR152Q8TDT2 470 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 KCTD13Q8WZ19 329 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 HSFY1Q96LI6 401 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 UBXN6Q9BZV1 441 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 TLE6Q9H808 572 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 PNPLA8Q9NP80 782 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ST7Q9NRC1 585 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 MAFFQ9ULX9 164 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 TFR2Q9UP52 801 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 INSL5Q9Y5Q6 135 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 HCFC2Q9Y5Z7 792 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 ADGRG1Q9Y653 693 aa14.96□□□□□ -0.01
RNF4-208ENST00000507247 OBSL1O75147 1896 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms