RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 AK8Q96MA6 479 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 RIPOR3Q96MK2 946 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 ZNF396Q96N95 335 aaPredicted RBP5.37□□□□□ -1.55
CPNE4-207ENST00000506687 CLIC6Q96NY7 704 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 TGS1Q96RS0 853 aaKnown RBP5.37□□□□□ -1.55
CPNE4-207ENST00000506687 LXNQ9BS40 222 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.37□□□□□ -1.55
CPNE4-207ENST00000506687 WNT8AQ9H1J5 351 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 DHX33Q9H6R0 707 aaKnown RBP5.37□□□□□ -1.55
CPNE4-207ENST00000506687 GP6Q9HCN6 339 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 ANKEF1Q9NU02 776 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 LRWD1Q9UFC0 647 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 DBR1Q9UK59 544 aaKnown RBP5.37□□□□□ -1.55
CPNE4-207ENST00000506687 CFAP45Q9UL16 551 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 PCDHA7Q9UN72 937 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 CEP131Q9UPN4 1083 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 UMODL1Q5DID0 1318 aa5.37□□□□□ -1.55
CPNE4-207ENST00000506687 DMDP11532 3685 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 PRRC2BQ5JSZ5 2229 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 DMXL1Q9Y485 3027 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 FAM237AA0A1B0GTK4 181 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SMIM35A0A1B0GVV1 85 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 LOC730098B7Z3J9 87 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 RBAK-RBAKDNI3L0D1 243 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 J3KRW8 73 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 MAGEB2O15479 319 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TLR5O60602 858 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 DKC1O60832 514 aaKnown RBP eCLIP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 GPR32O75388 356 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 MAFO75444 373 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CHRNA1P02708 482 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CTSBP07858 339 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 IQCF3P0C7M6 154 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CKBP12277 381 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 GRK6P43250 576 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ATXN1P54253 815 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CEBPZQ03701 1054 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 DRP2Q13474 957 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SMAD4Q13485 552 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 UBAP2LQ14157 1087 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 MBTPS1Q14703 1052 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TMEM266Q2M3C6 531 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 FAM47CQ5HY64 1035 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SPECC1Q5M775 1068 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ZNF618Q5T7W0 954 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 KRT79Q5XKE5 535 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 PLA2G4FQ68DD2 849 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SLC6A19Q695T7 634 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 DENND5AQ6IQ26 1287 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TAF2Q6P1X5 1199 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ELMSAN1Q6PJG2 1045 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SHC4Q6S5L8 630 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CLEC17AQ6ZS10 378 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 C1orf186Q6ZWK4 172 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 OTOP3Q7RTS5 596 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 MYCT1Q8N699 235 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TMEM105Q8N8V8 129 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ERMNQ8TAM6 284 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 PPP1R35Q8TAP8 253 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CXorf38Q8TB03 319 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 DEPTORQ8TB45 409 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CAGE1Q8TC20 777 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SNRNP27Q8WVK2 155 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 RUBCNQ92622 972 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TNPO1Q92973 898 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 EPSTI1Q96J88 318 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 FAM193BQ96PV7 902 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 NACC1Q96RE7 527 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SH2D3AQ9BRG2 576 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 RAB34Q9BZG1 259 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 WDR12Q9GZL7 423 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 NUCKS1Q9H1E3 243 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ADAMTS10Q9H324 1103 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SOX17Q9H6I2 414 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 NOL6Q9H6R4 1146 aaKnown RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ARFGAP3Q9NP61 516 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 XPNPEP1Q9NQW7 623 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TOPORSQ9NS56 1045 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 BLOC1S4Q9NUP1 217 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 OXSMQ9NWU1 459 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CLDND1Q9NY35 253 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 CHMP5Q9NZZ3 219 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 POLHQ9Y253 713 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 GPR55Q9Y2T6 319 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 KDM3AQ9Y4C1 1321 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 SCN5AQ14524 2016 aa5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ANKRD11Q6UB99 2663 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-207ENST00000506687 ACACBO00763 2458 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 LOXHD1Q8IVV2 1947 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 LCHNA4D1U4 455 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 E9PMD0 336 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 SHOXO15266 292 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 CUTAO60888 179 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 HIP1RO75146 1068 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 DGAT1O75907 488 aa5.35□□□□□ -1.55
CPNE4-207ENST00000506687 BAIAP3O94812 1187 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms