RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CDV3Q9UKY7 258 aaKnown RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 TICRRQ7Z2Z1 1910 aa13.96□□□□□ -0.18
TCOF1-209ENST00000506630 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 KRT37O76014 449 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 CD58P19256 250 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
TCOF1-209ENST00000506630 GABRR2P28476 465 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 GRIK1P39086 918 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 FMO5P49326 533 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 NDST1P52848 882 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 ORC1Q13415 861 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 TEAD2Q15562 447 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 SHKBP1Q8TBC3 707 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 CNOT6LQ96LI5 555 aaKnown RBP13.95□□□□□ -0.18
TCOF1-209ENST00000506630 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 LRRC3Q9BY71 257 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 PLA2G2FQ9BZM2 168 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 SLITRK6Q9H5Y7 841 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 ZSCAN32Q9NX65 697 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 HMGXB4Q9UGU5 601 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-209ENST00000506630 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
TCOF1-209ENST00000506630 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MIA3Q5JRA6 1907 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CLDN5O00501 218 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MOSPD3O75425 235 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MICAL2O94851 1124 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 FGF19O95750 216 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CSH1P0DML2 217 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CSH2P0DML3 217 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ANXA13P27216 316 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MAGEA11P43364 429 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ATXN1P54253 815 aaKnown RBP13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MARSP56192 900 aaKnown RBP13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CCDC183Q5T5S1 534 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 VSTM1Q6UX27 236 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ACOT1Q86TX2 421 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 UNC93AQ86WB7 457 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ZBTB44Q8NCP5 570 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 MED15Q96RN5 788 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 KXD1Q9BQD3 176 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ZNF518BQ9C0D4 1074 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 ATXN3LQ9H3M9 355 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CYP3A43Q9HB55 503 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 LTB4R2Q9NPC1 389 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 GDE1Q9NZC3 331 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 SMG5Q9UPR3 1016 aaKnown RBP13.94□□□□□ -0.18
TCOF1-209ENST00000506630 COQ4Q9Y3A0 265 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.94□□□□□ -0.18
TCOF1-209ENST00000506630 WDR87Q6ZQQ6 2873 aa13.94□□□□□ -0.18
TCOF1-209ENST00000506630 CACNA1BQ00975 2339 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 SLC38A8A6NNN8 435 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 TRIM66O15016 1216 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 CD72P21854 359 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 CDC25CP30307 473 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 CYP4F8P98187 520 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 CETN1Q12798 172 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 KCNH2Q12809 1159 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 LRMPQ12912 555 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 RBM43Q6ZSC3 357 aaKnown RBP13.93□□□□□ -0.18
TCOF1-209ENST00000506630 GAREM2Q75VX8 874 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 FAM35AQ86V20 835 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 TATDN2Q93075 761 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 USP18Q9UMW8 372 aa13.93□□□□□ -0.18
TCOF1-209ENST00000506630 MRPS17Q9Y2R5 130 aaKnown RBP13.93□□□□□ -0.18
TCOF1-209ENST00000506630 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-209ENST00000506630 GPR179Q6PRD1 2367 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 F8VP50 259 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 CILPO75339 1184 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 NOL4O94818 638 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 AFPP02771 609 aaKnown RBP13.92□□□□□ -0.18
TCOF1-209ENST00000506630 CCDC130P13994 396 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 HMGA1P17096 107 aaKnown RBP13.92□□□□□ -0.18
TCOF1-209ENST00000506630 MTIF2P46199 727 aaKnown RBP13.92□□□□□ -0.18
TCOF1-209ENST00000506630 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 STXBP5Q5T5C0 1151 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 GPR158Q5T848 1215 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 ZNF852Q6ZMS4 543 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 TPRG1Q6ZUI0 275 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 ARID3AQ99856 593 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 FAM126AQ9BYI3 521 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-209ENST00000506630 DNAI2Q9GZS0 605 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 FAM49BQ9NUQ9 324 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-209ENST00000506630 GMEB2Q9UKD1 530 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 CACNA1IQ9P0X4 2223 aa13.92□□□□□ -0.18
TCOF1-209ENST00000506630 NCANO14594 1321 aa13.91□□□□□ -0.18
TCOF1-209ENST00000506630 DMXL1Q9Y485 3027 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms