RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TRPC3Q13507 836 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 SH3RF2Q8TEC5 729 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 TRPM5Q9NZQ8 1165 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 GCNT4Q9P109 453 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 WNT6Q9Y6F9 365 aa26.35■■□□□ 1.81
HERC4-212ENST00000505760 SPAG17Q6Q759 2223 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 PVALEFA0A1B0GWK0 134 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 RNF40O75150 1001 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 TACC1O75410 805 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 PXNP49023 591 aaPredicted RBP26.34■■□□□ 1.81
HERC4-212ENST00000505760 CUL4BQ13620 913 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 BMT2Q1RMZ1 405 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 RESP18Q5W5W9 173 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 FBRSL1Q9HCM7 1045 aaKnown RBP26.34■■□□□ 1.81
HERC4-212ENST00000505760 SEMA4GQ9NTN9 838 aa26.34■■□□□ 1.81
HERC4-212ENST00000505760 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.34■■□□□ 1.81
HERC4-212ENST00000505760 SPTBN2O15020 2390 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 SDK1Q7Z5N4 2213 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 USP46P62068 366 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 NR1H3Q13133 447 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 KNOP1Q1ED39 458 aaKnown RBP26.33■■□□□ 1.81
HERC4-212ENST00000505760 EML3Q32P44 896 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 FBXO43Q4G163 708 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 ATL3Q6DD88 541 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 CEP57L1Q8IYX8 460 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 FAM160A2Q8N612 972 aaPredicted RBP26.33■■□□□ 1.81
HERC4-212ENST00000505760 NXF1Q9UBU9 619 aaKnown RBP26.33■■□□□ 1.81
HERC4-212ENST00000505760 CFAP45Q9UL16 551 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 ARHGAP26Q9UNA1 814 aa26.33■■□□□ 1.81
HERC4-212ENST00000505760 F8VP50 259 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 EXOC3O60645 756 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 PHACTR2O75167 634 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 CLSTN1O94985 981 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 FAM163BP0C2L3 166 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 PTPN1P18031 435 aaKnown RBP26.32■■□□□ 1.8
HERC4-212ENST00000505760 NAIF1Q69YI7 327 aaPredicted RBP26.32■■□□□ 1.8
HERC4-212ENST00000505760 C12orf56Q8IXR9 622 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 CD101Q93033 1021 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 RTKNQ9BST9 563 aa26.32■■□□□ 1.8
HERC4-212ENST00000505760 CCDC163A0A0D9SF12 145 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 PFKLP17858 780 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 MYL6P60660 151 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 NOP14P78316 857 aaKnown RBP26.31■■□□□ 1.8
HERC4-212ENST00000505760 CSRP2Q16527 193 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 GRAMD1CQ8IYS0 662 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 GOLGA5Q8TBA6 731 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 GAB3Q8WWW8 586 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 ZNF516Q92618 1163 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 SYAP1Q96A49 352 aaPredicted RBP26.31■■□□□ 1.8
HERC4-212ENST00000505760 C8orf48Q96LL4 319 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 TTLL2Q9BWV7 592 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 DPEP3Q9H4B8 488 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 NME7Q9Y5B8 376 aa26.31■■□□□ 1.8
HERC4-212ENST00000505760 A8MXQ7 604 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 RPP40O75818 363 aaKnown RBP26.3■■□□□ 1.8
HERC4-212ENST00000505760 NFATC1O95644 943 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 STAU1O95793 577 aaKnown RBP26.3■■□□□ 1.8
HERC4-212ENST00000505760 ABL1P00519 1130 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 TCF3P15923 654 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 ATICP31939 592 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 PPP3CCP48454 512 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 PSMD2Q13200 908 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 PRR23CQ6ZRP0 262 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 CAMKK1Q8N5S9 505 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 RPLP0P6Q8NHW5 317 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 ELOVL4Q9GZR5 314 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 GZF1Q9H116 711 aaPredicted RBP26.3■■□□□ 1.8
HERC4-212ENST00000505760 LINC00597Q9H2U6 94 aa26.3■■□□□ 1.8
HERC4-212ENST00000505760 DCDC2BA2VCK2 349 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 CCDC192P0DO97 292 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 CASP4P49662 377 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 DNM1Q05193 864 aaKnown RBP26.29■■□□□ 1.8
HERC4-212ENST00000505760 BIRC3Q13489 604 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 TDRD10Q5VZ19 366 aaKnown RBP26.29■■□□□ 1.8
HERC4-212ENST00000505760 B3GALNT2Q8NCR0 500 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 NETO1Q8TDF5 533 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 XYLT2Q9H1B5 865 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 SERTAD1Q9UHV2 236 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 MYO16Q9Y6X6 1858 aa26.29■■□□□ 1.8
HERC4-212ENST00000505760 EML5Q05BV3 1969 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.28■■□□□ 1.8
HERC4-212ENST00000505760 ZNF840PA6NDX5 716 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 LEFTY2O00292 366 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 FOXD2O60548 495 aaPredicted RBP26.28■■□□□ 1.8
HERC4-212ENST00000505760 SLFN14P0C7P3 912 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 CACNA2D4Q7Z3S7 1137 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 SPRYD3Q8NCJ5 442 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 SLITRK1Q96PX8 696 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 HHIPQ96QV1 700 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 ZNF518BQ9C0D4 1074 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 EXOC1Q9NV70 894 aa26.28■■□□□ 1.8
HERC4-212ENST00000505760 POLR3BQ9NW08 1133 aaPredicted RBP26.28■■□□□ 1.8
HERC4-212ENST00000505760 AXIN1O15169 862 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 AP3M2P53677 418 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 CACNA2D1P54289 1103 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 IFRD2Q12894 506 aaPredicted RBP26.27■■□□□ 1.8
HERC4-212ENST00000505760 TAF10Q12962 218 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 PKP1Q13835 747 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 ZNF699Q32M78 642 aa26.27■■□□□ 1.8
HERC4-212ENST00000505760 CCDC26Q8TAB7 109 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms