RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 HUS1O60921 280 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 ATG13O75143 517 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 AKAP3O75969 853 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 KCNK5O95279 499 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 GCNT3O95395 438 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 TOP3BO95985 862 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 CKMP06732 381 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CSH1P0DML2 217 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CSH2P0DML3 217 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 IDEP14735 1019 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 DRD1P21728 446 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 BCKDHBP21953 392 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 PNPLA4P41247 253 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CACNA2D1P54289 1103 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 RPL10AP62906 217 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 CREB5Q02930 508 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CEBPZQ03701 1054 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 PSMD2Q13200 908 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 DMC1Q14565 340 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 POSTNQ15063 836 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 PDGFRLQ15198 375 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 C2orf27AQ580R0 203 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 L1TD1Q5T7N2 865 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 LIMS2Q7Z4I7 341 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 METTL3Q86U44 580 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CBWD2Q8IUF1 395 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 SPATA2LQ8IUW3 424 aaPredicted RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 ADGRF2Q8IZF7 708 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CPA6Q8N4T0 437 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CCDC33Q8N5R6 958 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CAMKK1Q8N5S9 505 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 LRRC52Q8N7C0 313 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 FRMD1Q8N878 549 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 USP33Q8TEY7 942 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 NOC3LQ8WTT2 800 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 CD101Q93033 1021 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 MYLPFQ96A32 169 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CHAMP1Q96JM3 812 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 ACCSQ96QU6 501 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 TPSD1Q9BZJ3 242 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 RNF38Q9H0F5 515 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 INTS13Q9NVM9 706 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 ZMYM5Q9UJ78 669 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 SRPRBQ9Y5M8 271 aaKnown RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 BCLAF3A2AJT9 711 aaKnown RBP6.26□□□□□ -1.41
GYPB-205ENST00000505583 C4orf47A7E2U8 309 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 LEFTY2O00292 366 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 FOXD2O60548 495 aaPredicted RBP6.26□□□□□ -1.41
GYPB-205ENST00000505583 APBB3O95704 486 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 BMP15O95972 392 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 CYP17A1P05093 508 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 GAP43P17677 238 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 HDCP19113 662 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SPINK2P20155 84 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 GARTP22102 1010 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 BDNFP23560 247 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ABCD1P33897 745 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SLC6A11P48066 632 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 IFNAR2P48551 515 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 DGKEP52429 567 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SEC13P55735 322 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 RBP5P82980 135 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SHC2P98077 582 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 MYL7Q01449 175 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 RESTQ13127 1097 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 FBXO43Q4G163 708 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 EMC10Q5UCC4 262 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 RNF43Q68DV7 783 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ANO7Q6IWH7 933 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PSAPL1Q6NUJ1 521 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 C12orf40Q86WS4 652 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 TMEM86AQ8N2M4 240 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 GPD1LQ8N335 351 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PDILTQ8N807 584 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 MDGA1Q8NFP4 955 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ATP2A3Q93084 1043 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 MARVELD3Q96A59 401 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ELMO3Q96BJ8 720 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PCED1BQ96HM7 432 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 HPDLQ96IR7 371 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 USP28Q96RU2 1077 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SYT15Q9BQS2 421 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 MRPL45Q9BRJ2 306 aaKnown RBP6.26□□□□□ -1.41
GYPB-205ENST00000505583 GZF1Q9H116 711 aaPredicted RBP6.26□□□□□ -1.41
GYPB-205ENST00000505583 TMEM206Q9H813 350 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 OLFML3Q9NRN5 406 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 VPS45Q9NRW7 570 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms