RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-219ENST00000505392 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
CCHCR1-219ENST00000505392 RAXQ9Y2V3 346 aa12.42□□□□□ -0.42
CCHCR1-219ENST00000505392 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
CCHCR1-219ENST00000505392 ADAM23O75077 832 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 CYP17A1P05093 508 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 FTH1P19P0C7X4 201 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 ST3GAL1Q11201 340 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 SLC14A1Q13336 389 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 ADALQ6DHV7 355 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 RABEPKQ7Z6M1 372 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 KCNN1Q92952 543 aa12.41□□□□□ -0.42
CCHCR1-219ENST00000505392 ZNF638Q14966 1978 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 ANKRD63C9JTQ0 380 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 K7ENM7 598 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 LAD1O00515 517 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 TRAK2O60296 914 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 HUS1O60921 280 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 EIF2DP41214 584 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 PRPHP41219 470 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 GRIA2P42262 883 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 TNFRSF4P43489 277 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 PDE6CP51160 858 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 NEK4P51957 841 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 ANAPC15P60006 121 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 MYL7Q01449 175 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 HYIQ5T013 277 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 SLCO6A1Q86UG4 719 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 C12orf40Q86WS4 652 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 PKMYT1Q99640 499 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 RNF38Q9H0F5 515 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 ARHGEF4Q9NR80 690 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 GCN1Q92616 2671 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-219ENST00000505392 TBC1D3BA6NDS4 549 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 TISP43B9A030 160 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 FAM13AO94988 1023 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 GABRG2P18507 467 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 SCP2P22307 547 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 PNPLA4P41247 253 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 KDSRQ06136 332 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 RESTQ13127 1097 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 DHX8Q14562 1220 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 PLEKHG6Q3KR16 790 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 SLC41A1Q8IVJ1 513 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 RGL4Q8IZJ4 473 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 REEP2Q9BRK0 252 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 ZHX3Q9H4I2 956 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 TRPM5Q9NZQ8 1165 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 ODF2LQ9ULJ1 636 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 APOBEC2Q9Y235 224 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-219ENST00000505392 PI4KAP42356 2102 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 CELSR3Q9NYQ7 3312 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 A0A1W2PQD8 194 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 ZBTB24O43167 697 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 HCRTO43612 131 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 GJB3O75712 270 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 ABL1P00519 1130 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 PFKLP17858 780 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 GRIK1P39086 918 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 WASP42768 502 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 USP46P62068 366 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 SLC7A9P82251 487 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 GTF2BQ00403 316 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 SCARA3Q6AZY7 606 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 NAXDQ8IW45 347 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 KIAA1958Q8N8K9 716 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 NAT16Q8N8M0 369 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCHCR1-219ENST00000505392 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms