RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MAB21L3Q8N8X9 362 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 RBM15BQ8NDT2 890 aaKnown RBP8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 HPS1Q92902 700 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 GFM2Q969S9 779 aaKnown RBP8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 C7orf25Q9BPX7 421 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 ECSITQ9BQ95 431 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 APEX2Q9UBZ4 518 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 PPM1HQ9ULR3 514 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 MYH8P13535 1937 aa8.14□□□□□ -1.11
ATP2C1-208ENST00000504948 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 VAMP7P51809 220 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 MKRN3Q13064 507 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZIK1Q3SY52 487 aaPredicted RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 GPR107Q5VW38 600 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 C4orf50Q6ZRC1 276 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 FAM210AQ96ND0 272 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CBWD1Q9BRT8 395 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZNF577Q9BSK1 485 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZC3H12CQ9C0D7 883 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 TRIM17Q9Y577 477 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 C15orf38-AP3S2A0A0A6YYH1 394 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 C9JVG2 144 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 MED24O75448 989 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 PSMC3P17980 439 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ITIH2P19823 946 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ALDH4A1P30038 563 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 AP1B1Q10567 949 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 RABL6Q3YEC7 729 aaPredicted RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 FUT11Q495W5 492 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CBWD6Q4V339 395 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CBWD3Q5JTY5 395 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CBWD5Q5RIA9 395 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 OR6B2Q6IFH4 312 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ARPINQ7Z6K5 226 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CCDC103Q8IW40 242 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 DRAXINQ8NBI3 349 aaPredicted RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 BBOF1Q8ND07 529 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 PGM2Q96G03 612 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 CNGB3Q9NQW8 809 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 PRKAB1Q9Y478 270 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZC3H4Q9UPT8 1303 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 A0A1W2PQJ5 194 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 FOXP2O15409 715 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 DAB1O75553 588 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ITGA2BP08514 1039 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 FAAP100Q0VG06 881 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 RBM46Q8TBY0 533 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 PPP2R3CQ969Q6 453 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 OXNAD1Q96HP4 312 aaPredicted RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 DACH2Q96NX9 599 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 POLR3CQ9BUI4 534 aaPredicted RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 GPATCH2LQ9NWQ4 482 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 ZC3H7BQ9UGR2 993 aaKnown RBP8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 DNPEPQ9ULA0 475 aa8.13□□□□□ -1.11
ATP2C1-208ENST00000504948 HNRNPCL2B2RXH8 293 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 GSC2O15499 205 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HNRNPCL1O60812 293 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 E2F6O75461 281 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 AVPR1AP37288 418 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 SLC5A3P53794 718 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 DLG1Q12959 904 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TMTC4Q5T4D3 741 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 MYO1HQ8N1T3 1032 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ATXN2LQ8WWM7 1075 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 CDRT15Q96T59 188 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 PLEKHA5Q9HAU0 1116 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 KIAA1586Q9HCI6 787 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 KCNN4O15554 427 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TSPAN3O60637 253 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 RBP3P10745 1247 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 NPEPPSP55786 919 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 SH3BGRP55822 239 aaPredicted RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HDAC4P56524 1084 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 MORF4L2Q15014 288 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 SLC7A5P1Q8MH63 180 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ZNF317Q96PQ6 595 aaPredicted RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ROGDIQ9GZN7 287 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 KMT5AQ9NQR1 393 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 CYP11B2P19099 503 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 GJA8P48165 433 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 FOLH1Q04609 750 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TBC1D9BQ66K14 1250 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 B3GNT6Q6ZMB0 384 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HTRA1Q92743 480 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms