RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 DRD1P21728 446 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 DDX6P26196 483 aaKnown RBP eCLIP9.76□□□□□ -0.85
DHFR-202ENST00000504396 SCTRP47872 440 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 TAF6P49848 677 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 TOB1P50616 345 aaPredicted RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 NCKAP1LP55160 1127 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 NLRP12P59046 1061 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 IL17AQ16552 155 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 NAIF1Q69YI7 327 aaPredicted RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 TXNDC8Q6A555 127 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 DCP1BQ8IZD4 617 aaKnown RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 SPPL2BQ8TCT7 592 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 C2orf15Q8WU43 125 aaKnown RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 USP13Q92995 863 aaPredicted RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 ACDQ96AP0 544 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 CHFRQ96EP1 664 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 FAM83CQ9BQN1 747 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 PI4K2AQ9BTU6 479 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 MMTAG2Q9BU76 263 aaKnown RBP9.76□□□□□ -0.85
DHFR-202ENST00000504396 TDP1Q9NUW8 608 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 TBX20Q9UMR3 447 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 DERAQ9Y315 318 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 KIF3AQ9Y496 699 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 PCDHB5Q9Y5E4 795 aa9.76□□□□□ -0.85
DHFR-202ENST00000504396 OBSL1O75147 1896 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 GIPC1O14908 333 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 PIGRP01833 764 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 CYP11A1P05108 521 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 CKMP06732 381 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 HAPLN1P10915 354 aaPredicted RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 SPINK2P20155 84 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 IFNAR2P48551 515 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 GPR15P49685 360 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 ACOT2P49753 483 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 GALK1P51570 392 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 SEC13P55735 322 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 TSPY1Q01534 308 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 POU5F1Q01860 360 aaKnown RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 DMC1Q14565 340 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 MTF1Q14872 753 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 PDGFRLQ15198 375 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 UAP1L1Q3KQV9 507 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 FBXO43Q4G163 708 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 SDHAF4Q5VUM1 108 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 WSCD1Q658N2 575 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 GPBP1Q86WP2 473 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 TSTD1Q8NFU3 115 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 CD101Q93033 1021 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 ZNF560Q96MR9 790 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 TPSD1Q9BZJ3 242 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 DUS2Q9NX74 493 aaKnown RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 CFAP47Q6ZTR5 3102 aa9.75□□□□□ -0.85
DHFR-202ENST00000504396 CNOT1A5YKK6 2376 aaKnown RBP9.75□□□□□ -0.85
DHFR-202ENST00000504396 LNP1A1A4G5 178 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 PIRO00625 290 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 KHNYNO15037 678 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 TBCAO75347 108 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 GJA4P35212 333 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 DEKP35659 375 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 SLC12A3P55017 1021 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 ATP2C1P98194 919 aaPredicted RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 COL9A2Q14055 689 aaPredicted RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 SV2CQ496J9 727 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 ARL6IP4Q66PJ3 421 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 ADALQ6DHV7 355 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 ANO7Q6IWH7 933 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 SYT13Q7L8C5 426 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 LRRTM3Q86VH5 581 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 RNF217Q8TC41 542 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 ATP2A3Q93084 1043 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 ASB7Q9H672 318 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 FBRSL1Q9HCM7 1045 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 TMEM9BQ9NQ34 198 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 DPP3Q9NY33 737 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 UXTQ9UBK9 157 aaPredicted RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 CPSF3Q9UKF6 684 aaKnown RBP9.74□□□□□ -0.85
DHFR-202ENST00000504396 WNT6Q9Y6F9 365 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 CHD8Q9HCK8 2581 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 SDK1Q7Z5N4 2213 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
DHFR-202ENST00000504396 TRAV19A0A0A6YYK7 116 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 A0A0B4J269 797 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 BCLAF3A2AJT9 711 aaKnown RBP9.73□□□□□ -0.85
DHFR-202ENST00000504396 WIPF1O43516 503 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 TRAK2O60296 914 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 FAM189A1O60320 539 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 F11P03951 625 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 CSH1P0DML2 217 aa9.73□□□□□ -0.85
DHFR-202ENST00000504396 CSH2P0DML3 217 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms