RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PIDD1Q9HB75 910 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 ZNF334Q9HCZ1 680 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 DNMT3BQ9UBC3 853 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 DPP7Q9UHL4 492 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 CD207Q9UJ71 328 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 DAAM1Q9Y4D1 1078 aa14.04□□□□□ -0.16
PDLIM7-212ENST00000504380 A0A1W2PQJ5 194 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 HHLA1C9JL84 531 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 PIK3R2O00459 728 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 TRIM66O15016 1216 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 HNRNPA1P09651 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 NPR3P17342 541 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 KRT9P35527 623 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 RGS7P49802 495 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 ADKP55263 362 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 BPIFB4P59827 614 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 USP46P62068 366 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 MRPS5P82675 430 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 ZBED6P86452 979 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 TBX2Q13207 712 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 PLD1Q13393 1074 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 PKDCCQ504Y2 493 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 DNAJB7Q7Z6W7 309 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 GPR149Q86SP6 731 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 SPC24Q8NBT2 197 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 SCAMP5Q8TAC9 235 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 EPS8L1Q8TE68 723 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 DDX1Q92499 740 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 C8orf48Q96LL4 319 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 CORO1BQ9BR76 489 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 CSNK1G1Q9HCP0 422 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 DMAP1Q9NPF5 467 aaPredicted RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 HESX1Q9UBX0 185 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 CYTH4Q9UIA0 394 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 NOCTQ9UK39 431 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 LUC7L2Q9Y383 392 aaKnown RBP14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 C2orf16Q68DN1 1984 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 BRWD1Q9NSI6 2320 aa14.03□□□□□ -0.16
PDLIM7-212ENST00000504380 REV3LO60673 3130 aa14.02□□□□□ -0.16
PDLIM7-212ENST00000504380 MED7O43513 233 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 XYLBO75191 536 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 GABBR2O75899 941 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 MYL4P12829 197 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 FERP16591 822 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 GJA1P17302 382 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 HOXB8P17481 243 aaPredicted RBP14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 HOXA9P31269 272 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 PDE6CP51160 858 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 BST2Q10589 180 aaKnown RBP14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 VEPH1Q14D04 833 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 TAF12Q16514 161 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 PIGZQ86VD9 579 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 DRC7Q8IY82 874 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 ELMOD1Q8N336 334 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 WDTC1Q8N5D0 677 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 CMASQ8NFW8 434 aaPredicted RBP14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 ADAM7Q9H2U9 754 aa14.02□□□□□ -0.17
PDLIM7-212ENST00000504380 TNFRSF10BO14763 440 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 RHOP08100 348 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 PTPN2P17706 415 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 CCR2P41597 374 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 GPD2P43304 727 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 SLC5A3P53794 718 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 BCAT1P54687 386 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 FMO1Q01740 532 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 STILQ15468 1287 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 PMF1Q6P1K2 205 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 TMC8Q8IU68 726 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 SMRP1Q8NCR6 262 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 C1orf131Q8NDD1 294 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 ZNF397Q8NF99 534 aaPredicted RBP14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 SLC35F5Q8WV83 523 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 NDRG1Q92597 394 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 PSMG2Q969U7 264 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 TCEAL4Q96EI5 215 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 SPATA17Q96L03 361 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 AGPAT1Q99943 283 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 LRRC3Q9BY71 257 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 HAUS4Q9H6D7 363 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 AIPL1Q9NZN9 384 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 TJP2Q9UDY2 1190 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 MYO6Q9UM54 1294 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 USP15Q9Y4E8 981 aaPredicted RBP14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 NOTCH4Q99466 2003 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 GREB1Q4ZG55 1949 aa14.01□□□□□ -0.17
PDLIM7-212ENST00000504380 BDP1A6H8Y1 2624 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms