RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF148Q9UQR1 794 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 GINS2Q9Y248 185 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 R3HDM2Q9Y2K5 976 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CFAP69A5D8W1 941 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 A8MXQ7 604 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 DNALI1O14645 258 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 MDM4O15151 490 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 GPR182O15218 404 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TP73O15350 636 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF623O75123 536 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 CAND2O75155 1236 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 CABYRO75952 493 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TTC4O95801 387 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 PFKMP08237 780 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 RARBP10826 455 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SKIP12755 728 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TSHRP16473 764 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 MIPP30301 263 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 RPL9P32969 192 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 MDH1P40925 334 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 ITGA8P53708 1063 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 PPP2R2AP63151 447 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TMEM62Q0P6H9 643 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SNX1Q13596 522 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 HIC1Q14526 733 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SLC29A2Q14542 456 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TNFAIP8L3Q5GJ75 292 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 EFHC1Q5JVL4 640 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 GNASQ5JWF2 1037 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 OR6B2Q6IFH4 312 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 MRPL10Q7Z7H8 261 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 CNPY4Q8N129 248 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 RIBC1Q8N443 379 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 ARFGAP1Q8N6T3 406 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 KCTD6Q8NC69 237 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SMG8Q8ND04 991 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 ATG4AQ8WYN0 398 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 PPP1R10Q96QC0 940 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 HNRNPABQ99729 332 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 MRPL45Q9BRJ2 306 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 FRMD8Q9BZ67 464 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
COL1A1-210ENST00000504289 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 IPPQ9Y573 584 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 TRIP11Q15643 1979 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 SCN1AP35498 2009 aa10.28□□□□□ -0.76
COL1A1-210ENST00000504289 CASP8AP2Q9UKL3 1982 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 FAM170AA1A519 330 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ARHGEF37A1IGU5 675 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 E5RJQ4 531 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 GJB6O95452 261 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ZFXP17010 805 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TGM2P21980 687 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 SDC4P31431 198 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 LHX1P48742 406 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ARSEP51690 589 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 APLP1P51693 650 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 LILRA4P59901 499 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 BEX3Q00994 111 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 STAT4Q14765 748 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 RASA2Q15283 850 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ATP13A4Q4VNC1 1196 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 PPP1R26Q5T8A7 1209 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 IZUMO3Q5VZ72 239 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TWF2Q6IBS0 349 aaKnown RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 LRRC31Q6UY01 552 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 FAM183BPQ6ZVS7 135 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ANKS1BQ7Z6G8 1248 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 ACOT1Q86TX2 421 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 FAM228AQ86W67 206 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TTC30AQ86WT1 665 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 UBA3Q8TBC4 463 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 KBTBD7Q8WVZ9 684 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 RXFP2Q8WXD0 754 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 KCTD13Q8WZ19 329 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 CENPIQ92674 756 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 C18orf25Q96B23 403 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 SENP6Q9GZR1 1112 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 FAM107BQ9H098 131 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 AAASQ9NRG9 546 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 TMEM51Q9NW97 253 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-210ENST00000504289 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 GGA2Q9UJY4 613 aa10.27□□□□□ -0.77
COL1A1-210ENST00000504289 DNPEPQ9ULA0 475 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms