RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 TPTEP56180 551 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 EEFSECP57772 596 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 RPS16P62249 146 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 CCNIQ14094 377 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 SLC29A2Q14542 456 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 TBC1D25Q3MII6 688 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 HSP90AB2PQ58FF8 381 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 C3orf38Q5JPI3 329 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 CERCAMQ5T4B2 595 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 CEP85Q6P2H3 762 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 PARS2Q7L3T8 475 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 SLC29A4Q7RTT9 530 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 MICU3Q86XE3 530 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 RASAL3Q86YV0 1011 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 CCAR1Q8IX12 1150 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 RP9Q8TA86 221 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 TBC1D5Q92609 795 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 SARAFQ96BY9 339 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 TIFAQ96CG3 184 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 MSLNLQ96KJ4 702 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 R3HDMLQ9H3Y0 253 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 PNPLA8Q9NP80 782 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 GEMIN8Q9NWZ8 242 aaKnown RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 STK32BQ9NY57 414 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 ARPP21Q9UBL0 812 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 ITGB1BP2Q9UKP3 347 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 PADI4Q9UM07 663 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 SNX13Q9Y5W8 968 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 COL11A2P13942 1736 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 RASAL1O95294 804 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 PRKCBP05771 671 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 CSF1RP07333 972 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ELFN1P0C7U0 828 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 DRD4P21917 467 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ADORA2AP29274 412 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 MTHFSP49914 203 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ARHGEF7Q14155 803 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ZIK1Q3SY52 487 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 AARS2Q5JTZ9 985 aaKnown RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 CACHD1Q5VU97 1274 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 SUMO4Q6EEV6 95 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 MTHFD1LQ6UB35 978 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 IZUMO1Q8IYV9 350 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ABRAQ8N0Z2 381 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 FANCBQ8NB91 859 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 FAM98AQ8NCA5 519 aaKnown RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 OR56A3Q8NH54 315 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 PHKBQ93100 1093 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 R3HDM4Q96D70 268 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF764Q96H86 408 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 BBC3Q96PG8 261 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 STRBPQ96SI9 672 aaKnown RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 UNKQ9C0B0 810 aaKnown RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 ZCWPW1Q9H0M4 648 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 DHX36Q9H2U1 1008 aaKnown RBP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 DDX21Q9NR30 783 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-208ENST00000504047 DUSP22Q9NRW4 184 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 COL20A1Q9P218 1284 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 USP22Q9UPT9 525 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 PCDHGB6Q9Y5F9 930 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 CDY1Q9Y6F8 540 aa3.74□□□□□ -1.81
ATXN3-208ENST00000504047 AQP7P3A6NL99 342 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 RHPN2P1A8MT19 583 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 H0YIZ8 118 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PQBP1O60828 265 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SRGAP2O75044 1071 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PIAS2O75928 621 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 JTBO76095 146 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 HNRNPCP07910 306 aaKnown RBP eCLIP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 HMGB1P09429 215 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 TXNP10599 105 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 TPH1P17752 444 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ENGP17813 658 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ACVR2AP27037 513 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ITPKBP27987 946 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 EPHA3P29320 983 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PTDSS1P48651 473 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 CARSP49589 748 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 CPT1AP50416 773 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 BCAT1P54687 386 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SUMO2P61956 95 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SP2Q02086 613 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 NHLH1Q02575 133 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SAFBQ15424 915 aaKnown RBP eCLIP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PCID2Q5JVF3 399 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ZDHHC24Q6UX98 284 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PTF1AQ7RTS3 328 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 AMIGO2Q86SJ2 522 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 CAND1Q86VP6 1230 aaKnown RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SESTD1Q86VW0 696 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 RAB11FIP4Q86YS3 637 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 KRT78Q8N1N4 520 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SDR16C5Q8N3Y7 309 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ABHD11Q8NFV4 315 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 TMEM171Q8WVE6 324 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 SOCS4Q8WXH5 440 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 RSPRY1Q96DX4 576 aa3.73□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF668Q96K58 619 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-208ENST00000504047 PRDM13Q9H4Q3 707 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms