RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 C6orf10Q5SRN2 563 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 STKLD1Q8NE28 680 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 SPIRE2Q8WWL2 714 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 PABPC5Q96DU9 382 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 GID8Q9NWU2 228 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 TSR3Q9UJK0 312 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 HNRNPCL2B2RXH8 293 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM86B1E9PN63 330 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 CYTH3O43739 400 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 OR1G1P47890 313 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 SUGP1Q8IWZ8 645 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 PNMA5Q96PV4 448 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 CD248Q9HCU0 757 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 KCND1Q9NSA2 647 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 PTK6Q13882 451 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 ACCSLQ4AC99 568 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 LINC00523Q86TU6 105 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 NUP93Q8N1F7 819 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF263O14978 683 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 SUPT3HO75486 399 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 DDX5P17844 614 aaKnown RBP16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 PPATQ06203 517 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 APLFQ8IW19 511 aaPredicted RBP16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 SLC24A2Q9UI40 661 aa16.77■□□□□ 0.27
HMGXB3-202ENST00000503427 TRPC5OSA6NMA1 111 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 KCNMA1Q12791 1236 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 OVGP1Q12889 678 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PDK2Q15119 407 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 AASDHQ4L235 1098 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 DLGAP2Q9P1A6 1054 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PYGLP06737 847 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 LRRC8BQ6P9F7 803 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PCSK9Q8NBP7 692 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 SLC39A10Q9ULF5 831 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 SLITRK3O94933 977 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 HIST1H2AGP0C0S8 130 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 HIST1H2ADP20671 130 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 KCNA4P22459 653 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PSMC6P62333 389 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 NUDT18Q6ZVK8 323 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 EFL1Q7Z2Z2 1120 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 HIST1H2AHQ96KK5 128 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ZNF512Q96ME7 567 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 HIST1H2AJQ99878 128 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 H2AFJQ9BTM1 129 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PDP2Q9P2J9 529 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 DCDC2Q9UHG0 476 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 SLIT3O75094 1523 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 RRM1P23921 792 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ATICP31939 592 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 THPOP40225 353 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 PCYT1AP49585 367 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 IPMKQ8NFU5 416 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 LZICQ8WZA0 190 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ILKAPQ9H0C8 392 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 CYP3A43Q9HB55 503 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 H3BRB1 525 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 HSPA13P48723 471 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 SLC30A10Q6XR72 485 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 CLEC4FQ8N1N0 589 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 TUT1Q9H6E5 874 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 IRAK4Q9NWZ3 460 aa16.76■□□□□ 0.27
HMGXB3-202ENST00000503427 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 APOA1P02647 267 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 SEZ6Q53EL9 994 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 IFNEQ86WN2 208 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 GALNT4Q8N4A0 578 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 HAO1Q9UJM8 370 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 SLC30A1Q9Y6M5 507 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 HNRNPCP07910 306 aaKnown RBP eCLIP16.75■□□□□ 0.277e-7■■■□□ 18.7
HMGXB3-202ENST00000503427 HOXC6P09630 235 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 SLITRK1Q96PX8 696 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 NAT9Q9BTE0 207 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 PCDHB7Q9Y5E2 793 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 LSM8O95777 96 aaKnown RBP16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 RANBP1P43487 201 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 OTUD4Q01804 1114 aaKnown RBP16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 CYP2W1Q8TAV3 490 aa16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 SEPT5Q99719 369 aaPredicted RBP16.75■□□□□ 0.27
HMGXB3-202ENST00000503427 MAGEA13PA6NCF6 341 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms