RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 B4GALT3O60512 393 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 ATP2C2O75185 946 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RNF8O76064 485 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 ITGB1P05556 798 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 KRT7P08729 469 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 PSMA2P25787 234 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 TKTP29401 623 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 PCK1P35558 622 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CREMQ03060 361 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 BTG3Q14201 252 aaPredicted RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 USP41Q3LFD5 358 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CTXN3Q4LDR2 81 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 VARS2Q5ST30 1063 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CYP4A22Q5TCH4 519 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 SEL1L2Q5TEA6 688 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 POTEHQ6S545 545 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 KCNT2Q6UVM3 1135 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 OLFML1Q6UWY5 402 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CLEC20AQ6ZU45 233 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 PIGZQ86VD9 579 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 SIX6OS1Q8N1H7 587 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 SPPL2BQ8TCT7 592 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 ACTRT1Q8TDG2 376 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 HERVK_113Q902F9 699 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RABGGTAQ92696 567 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 GOLGA1Q92805 767 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CD101Q93033 1021 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 MYLPFQ96A32 169 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM169Q96HH4 297 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 IGSF21Q96ID5 467 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 PKMYT1Q99640 499 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RTP3Q9BQQ7 232 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CARD6Q9BX69 1037 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 CWH43Q9H720 699 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RC3H2Q9HBD1 1191 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 KRT82Q9NSB4 513 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 MARCH5Q9NX47 278 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 DDX56Q9NY93 547 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RRN3Q9NYV6 651 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 SSX2IPQ9Y2D8 614 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 RWDD3Q9Y3V2 267 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 INSL6Q9Y581 213 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 PCDHA3Q9Y5H8 950 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 BACE2Q9Y5Z0 518 aa8.55□□□□□ -1.04
TOPBP1-202ENST00000503338 ZBBXA8MT70 800 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PGRMC1O00264 195 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PAPSS1O43252 624 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 CTIFO43310 598 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 HCRTO43612 131 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 NCK2O43639 380 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 HSF2BPO75031 334 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 GJB5O95377 273 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 SOD2P04179 222 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 TUBBP07437 444 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 GPD1P21695 349 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 IGFBP6P24592 240 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 MAGEA11P43364 429 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RGS7P49802 495 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 GATMP50440 423 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF143P52747 638 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 MAP3K7CLP57077 242 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 COPS2P61201 443 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RPL7AP62424 266 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 DEFB103AP81534 67 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 MRPS5P82675 430 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 KRT17Q04695 432 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 C2CD6Q53TS8 623 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RAB41Q5JT25 222 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 KIAA1841Q6NSI8 718 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM183BPQ6ZVS7 135 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PAQR9Q6ZVX9 377 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF365Q70YC5 407 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 OTOP2Q7RTS6 562 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 POLNQ7Z5Q5 900 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 CREG2Q8IUH2 290 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RNF168Q8IYW5 571 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC39A11Q8N1S5 342 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RASGEF1CQ8N431 466 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 OR10T2Q8NGX3 314 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 IRGQQ8WZA9 623 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 UBXN4Q92575 508 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 BADQ92934 168 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 RBM41Q96IZ5 413 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 CNPY3Q9BT09 278 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 HERC2P3Q9BVR0 1158 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 GPR62Q9BZJ7 368 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 SPG21Q9NZD8 308 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 HSFX1Q9UBD0 423 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms