RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
MBD4-204ENST00000503197 PBX4Q9BYU1 374 aa16.07■□□□□ 0.16
MBD4-204ENST00000503197 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
MBD4-204ENST00000503197 RWDD3Q9Y3V2 267 aa16.07■□□□□ 0.16
MBD4-204ENST00000503197 WDR27A2RRH5 827 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 HHLA1C9JL84 531 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 BUB1O43683 1085 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 CALB1P05937 261 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 CTSAP10619 480 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 DNAJB1P25685 340 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 OR1D2P34982 312 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 TCEAL1Q15170 157 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 PTPN14Q15678 1187 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 PLEKHA7Q6IQ23 1121 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 XYLT1Q86Y38 959 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 GPR65Q8IYL9 337 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 C18orf8Q96DM3 657 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
MBD4-204ENST00000503197 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 ABI2Q9NYB9 513 aaPredicted RBP16.06■□□□□ 0.16
MBD4-204ENST00000503197 STK39Q9UEW8 545 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 PATJQ8NI35 1801 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
MBD4-204ENST00000503197 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
MBD4-204ENST00000503197 MTMR11A4FU01 709 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 MOCS3O95396 460 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 TTC9BQ8N6N2 239 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 SPPL3Q8TCT6 385 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 HSFY1Q96LI6 401 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 C16orf45Q96MC5 204 aaPredicted RBP16.06■□□□□ 0.16
MBD4-204ENST00000503197 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
MBD4-204ENST00000503197 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 PCDHB5Q9Y5E4 795 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 CAPN6Q9Y6Q1 641 aa16.06■□□□□ 0.16
MBD4-204ENST00000503197 GJB6O95452 261 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 GSCP56915 257 aaPredicted RBP16.05■□□□□ 0.16
MBD4-204ENST00000503197 SLC8A3P57103 927 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 ERVFC1P60507 584 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 GPRIN1Q7Z2K8 1008 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 KCTD13Q8WZ19 329 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 PIWIL1Q96J94 861 aaKnown RBP16.05■□□□□ 0.16
MBD4-204ENST00000503197 NUP85Q9BW27 656 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 RXFP1Q9HBX9 757 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 DMAP1Q9NPF5 467 aaPredicted RBP16.05■□□□□ 0.16
MBD4-204ENST00000503197 CYLDQ9NQC7 956 aa16.05■□□□□ 0.16
MBD4-204ENST00000503197 F8VP50 259 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 FANCGO15287 622 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 PAPSS1O43252 624 aaPredicted RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 MTA2O94776 668 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 ERVK-21P61565 698 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 CAMK1Q14012 370 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 PPP1R15BQ5SWA1 713 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 C3orf20Q8ND61 904 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 MCRS1Q96EZ8 462 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 TGS1Q96RS0 853 aaKnown RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 SYNCQ9H7C4 482 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 CTTNBP2NLQ9P2B4 639 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 ABLIM3O94929 683 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 RB1P06400 928 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 MAGEA11P43364 429 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 SMARCB1Q12824 385 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 RAB41Q5JT25 222 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 FAM183BPQ6ZVS7 135 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 MSANTD4Q8NCY6 345 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 POF1BQ8WVV4 589 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 C11orf84Q9BUA3 381 aaPredicted RBP16.04■□□□□ 0.16
MBD4-204ENST00000503197 PRO3102Q9H379 93 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 PARVAQ9NVD7 372 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 UVRAGQ9P2Y5 699 aa16.04■□□□□ 0.16
MBD4-204ENST00000503197 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 GRM6O15303 877 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 TEX28O15482 410 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 LCP1P13796 627 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
MBD4-204ENST00000503197 GPR15P49685 360 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 NDUFV1P49821 464 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 RPL7AP62424 266 aaKnown RBP16.03■□□□□ 0.16
MBD4-204ENST00000503197 ADIGQ0VDE8 80 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 RAB33AQ14088 237 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 VSTM1Q6UX27 236 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 ZNF461Q8TAF7 563 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
MBD4-204ENST00000503197 SPPL2BQ8TCT7 592 aa16.03■□□□□ 0.16
MBD4-204ENST00000503197 CLEC4CQ8WTT0 213 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms