RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 SLC18A2Q05940 514 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 CCDC62Q6P9F0 684 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 TFAP2BQ92481 460 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 TTC17Q96AE7 1141 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 MMADHCQ9H3L0 296 aaPredicted RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 TAS2R1Q9NYW7 299 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 RGS17Q9UGC6 210 aaPredicted RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 IL1BP01584 269 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 SUPT20HL2P0C7V6 817 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 ESRRAP11474 423 aaPredicted RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 ARL2P36404 184 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 MYL6P60660 151 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 BASP1P80723 227 aaKnown RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 OCRLQ01968 901 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 SUPT20HL1Q3ZLR7 823 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 IRGCQ6NXR0 463 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 TMEM154Q6P9G4 183 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.62■■□□□ 1.69
DDX41-202ENST00000503078 NSUN6Q8TEA1 469 aaKnown RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 CDHR1Q96JP9 859 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 NIF3L1Q9GZT8 377 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 DHX33Q9H6R0 707 aaKnown RBP25.62■■□□□ 1.69
DDX41-202ENST00000503078 SYNCQ9H7C4 482 aa25.62■■□□□ 1.69
DDX41-202ENST00000503078 PSMG1O95456 288 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 NPTXRO95502 500 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 BGNP21810 368 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 MXRA7P84157 204 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 SLC34A1Q06495 639 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 SH2D5Q6ZV89 423 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 WDR49Q8IV35 697 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 IGDCC3Q8IVU1 814 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 BRSK2Q8IWQ3 736 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 TTLL6Q8N841 843 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 MTMR14Q8NCE2 650 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 SLC44A1Q8WWI5 657 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 ATG4CQ96DT6 458 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 WNK4Q96J92 1243 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 LRCH1Q9Y2L9 728 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 KRT3P12035 628 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 ELK3P41970 407 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 ZNF200P98182 395 aaPredicted RBP25.61■■□□□ 1.69
DDX41-202ENST00000503078 SCYL3Q8IZE3 742 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 FAM71DQ8N9W8 422 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 JOSD2Q8TAC2 188 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 NRG4Q8WWG1 115 aa25.61■■□□□ 1.69
DDX41-202ENST00000503078 TCRBV9S1A1TA0A576 114 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 CAPN9O14815 690 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 INHBAP08476 426 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 EIF3EP60228 445 aaKnown RBP25.6■■□□□ 1.69
DDX41-202ENST00000503078 FAAP100Q0VG06 881 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 DPYSL3Q14195 570 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 OXNAD1Q96HP4 312 aaPredicted RBP25.6■■□□□ 1.69
DDX41-202ENST00000503078 CNTN3Q9P232 1028 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 POLIQ9UNA4 740 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 SPDYE5A6NIY4 337 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 CD48P09326 243 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 PYGBP11216 843 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 POLR2BP30876 1174 aaKnown RBP25.6■■□□□ 1.69
DDX41-202ENST00000503078 MTMR2Q13614 643 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 KBTBD12Q3ZCT8 623 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 FAM91A1Q658Y4 838 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 KIAA0319LQ8IZA0 1049 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 RTKN2Q8IZC4 609 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 SCG3Q8WXD2 468 aaKnown RBP25.6■■□□□ 1.69
DDX41-202ENST00000503078 MTMR12Q9C0I1 747 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 TMEM134Q9H6X4 195 aa25.6■■□□□ 1.69
DDX41-202ENST00000503078 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.6■■□□□ 1.69
DDX41-202ENST00000503078 APOC4-APOC2K7ER74 178 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 APOC2P02655 101 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 MYL2P10916 166 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 SKIP12755 728 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 TNFSF9P41273 254 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 PTPN20Q4JDL3 420 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 POTEAQ6S8J7 498 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 LRRC74BQ6ZQY2 392 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 RFX6Q8HWS3 928 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 FNIP1Q8TF40 1166 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 WDR60Q8WVS4 1066 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 STMN2Q93045 179 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 FCHO1O14526 889 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 OATP04181 439 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 FESP07332 822 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 RARBP10826 455 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 SERPINB4P48594 390 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 DENND1BQ6P3S1 775 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 SLC7A3Q8WY07 619 aa25.59■■□□□ 1.69
DDX41-202ENST00000503078 STX18Q9P2W9 335 aaKnown RBP25.59■■□□□ 1.69
DDX41-202ENST00000503078 EME2A4GXA9 379 aaPredicted RBP25.58■■□□□ 1.69
DDX41-202ENST00000503078 C2orf71A6NGG8 1288 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 KBTBD13C9JR72 458 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 KLF11O14901 512 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 MCF2LO15068 1137 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 TBX10O75333 385 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 WEE2P0C1S8 567 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 GRM1Q13255 1194 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 ZRSR2Q15696 482 aaKnown RBP25.58■■□□□ 1.69
DDX41-202ENST00000503078 TTC7BQ86TV6 843 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 VCXQ9H320 206 aa25.58■■□□□ 1.69
DDX41-202ENST00000503078 SCAF8Q9UPN6 1271 aaKnown RBP25.58■■□□□ 1.69
DDX41-202ENST00000503078 COL4A5P29400 1685 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms