RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 PCDHA3Q9Y5H8 950 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 ESYT3A0FGR9 886 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TRIM43BA6NCK2 446 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 NT5C1B-RDH14C9J2C7 533 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 RPLP2P05387 115 aaKnown RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 GLI1P08151 1106 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 OR4Q2P0C623 313 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 CTNNA2P26232 953 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 SSR1P43307 286 aaKnown RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 GABRB2P47870 512 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 ATXN1P54253 815 aaKnown RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 GYS2P54840 703 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 CKAP4Q07065 602 aaKnown RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 DSC1Q08554 894 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 GRIK3Q13003 919 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TUSC3Q13454 348 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 C15orf59Q2T9L4 293 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 NOMO2Q5JPE7 1267 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 ARHGAP17Q68EM7 881 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 OR6B2Q6IFH4 312 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 LEKR1Q6ZMV7 388 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TMEM173Q86WV6 379 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 HACE1Q8IYU2 909 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 MMGT1Q8N4V1 131 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 MSANTD4Q8NCY6 345 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 C3orf20Q8ND61 904 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 STKLD1Q8NE28 680 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 ZMIZ2Q8NF64 920 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 ACTRT1Q8TDG2 376 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 BCL7CQ8WUZ0 217 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TRIM43Q96BQ3 446 aaPredicted RBP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 PGBD4Q96DM1 585 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 PBKQ96KB5 322 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 CASD1Q96PB1 797 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 KCNK16Q96T55 309 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.7□□□□□ -1.18
CPNE4-202ENST00000502818 SLC4A5Q9BY07 1137 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 FUT8Q9BYC5 575 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 SYNCQ9H7C4 482 aa7.7□□□□□ -1.18
CPNE4-202ENST00000502818 SIGLEC16A6NMB1 481 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PGRMC1O00264 195 aaKnown RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 MAP2K7O14733 419 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 INPPL1O15357 1258 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 RAD51CO43502 376 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 KRT3P12035 628 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 LCP1P13796 627 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PAFAH1B1P43034 410 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 OR1G1P47890 313 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 LMAN1P49257 510 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PSEN1P49768 467 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PITX1P78337 314 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 BFSP2Q13515 415 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 LONRF2Q1L5Z9 754 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 SMTNL2Q2TAL5 461 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 KCNT1Q5JUK3 1230 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 FAM102AQ5T9C2 384 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 TTC27Q6P3X3 843 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 DCUN1D2Q6PH85 259 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 OLFML1Q6UWY5 402 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 ANKRD52Q8NB46 1076 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 RSPH1Q8WYR4 309 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 RNF25Q96BH1 459 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PCED1BQ96HM7 432 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CFAP57Q96MR6 1250 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 GDAP1L1Q96MZ0 367 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PEBP4Q96S96 227 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 TSPAN18Q96SJ8 248 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 SMOQ99835 787 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 SELENOOQ9BVL4 669 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 HEMGNQ9BXL5 484 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 TBX21Q9UL17 535 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 R3HDM2Q9Y2K5 976 aaKnown RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CEP83Q9Y592 693 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 KRIT1O00522 736 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 LRCH4O75427 683 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 UPP2O95045 317 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 EOMESO95936 686 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CD48P09326 243 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 RARAP10276 462 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PSMA2P25787 234 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 RPL9P32969 192 aaKnown RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 GJA8P48165 433 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 MAP3K7CLP57077 242 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 ZNF268Q14587 947 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 BRD3Q15059 726 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CCDC14Q49A88 953 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 FBXO46Q6PJ61 603 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 GLB1LQ6UWU2 654 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CLEC20AQ6ZU45 233 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 HFE2Q6ZVN8 426 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 CYP4V2Q6ZWL3 525 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 TAS1R1Q7RTX1 841 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 TMEM110Q86TL2 294 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PIGZQ86VD9 579 aa7.69□□□□□ -1.18
CPNE4-202ENST00000502818 SUGP1Q8IWZ8 645 aaKnown RBP7.69□□□□□ -1.18
CPNE4-202ENST00000502818 PRELID2Q8N945 189 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms