RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 SSX2IPQ9Y2D8 614 aa5.38□□□□□ -1.55
CCSER1-202ENST00000502478 CASKIN1Q8WXD9 1431 aa5.38□□□□□ -1.55
CCSER1-202ENST00000502478 ZNF518AQ6AHZ1 1483 aa5.38□□□□□ -1.55
CCSER1-202ENST00000502478 TJP3O95049 919 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 FESP07332 822 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 NPSP0C0P6 89 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
CCSER1-202ENST00000502478 GUCY2FP51841 1108 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 GTF2H3Q13889 308 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 LONRF3Q496Y0 759 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 MIER2Q8N344 545 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 LRRC71Q8N4P6 559 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 CPA6Q8N4T0 437 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 ATG4AQ8WYN0 398 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 MTMR8Q96EF0 704 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 RITA1Q96K30 269 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 CAMKK2Q96RR4 588 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 PDGFCQ9NRA1 345 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 CFDP1Q9UEE9 299 aaPredicted RBP5.37□□□□□ -1.55
CCSER1-202ENST00000502478 SPAG9O60271 1321 aaKnown RBP5.37□□□□□ -1.55
CCSER1-202ENST00000502478 MTUS2Q5JR59 1369 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 CCDC18Q5T9S5 1454 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 LRRIQ1Q96JM4 1722 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 FER1L4A9Z1Z3 1794 aa5.37□□□□□ -1.55
CCSER1-202ENST00000502478 H7C1Q1 480 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 DTNBO60941 627 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 BCAR3O75815 825 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 AHSGP02765 367 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 TYRP14679 529 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 PXDC1Q5TGL8 231 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 GGT6Q6P531 493 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 LAYNQ6UX15 382 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 PARS2Q7L3T8 475 aaKnown RBP5.36□□□□□ -1.55
CCSER1-202ENST00000502478 PTDSS2Q9BVG9 487 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 TTYH3Q9C0H2 523 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 COL4A3BPQ9Y5P4 624 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 CCNB3Q8WWL7 1395 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 ARHGEF12Q9NZN5 1544 aa5.36□□□□□ -1.55
CCSER1-202ENST00000502478 DIP2CQ9Y2E4 1556 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 FYCO1Q9BQS8 1478 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 UHRF1BP1Q6BDS2 1440 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 ZNF644Q9H582 1327 aaPredicted RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 E5RJQ4 531 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 PXNP49023 591 aaPredicted RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 POLGP54098 1239 aaPredicted RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 PDE1AP54750 535 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 AMPD3Q01432 767 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 RABEP1Q15276 862 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 TRIP6Q15654 476 aaKnown RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 PTPROQ16827 1216 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 ARHGAP40Q5TG30 622 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 EMC10Q5UCC4 262 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 CNGA4Q8IV77 575 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 GLG1Q92896 1179 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 DAZAP1Q96EP5 407 aaKnown RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 FAM167AQ96KS9 214 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 GLOD4Q9HC38 313 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 PCDH12Q9NPG4 1184 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 LMBRD1Q9NUN5 540 aa5.35□□□□□ -1.55
CCSER1-202ENST00000502478 NOP58Q9Y2X3 529 aaKnown RBP5.35□□□□□ -1.55
CCSER1-202ENST00000502478 ABCC1P33527 1531 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 SYCP2Q9BX26 1530 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 WDR17Q8IZU2 1322 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 A1L4Q6 167 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 ERC2O15083 957 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 INSIG1O15503 277 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 KATNA1O75449 491 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 FTLP02792 175 aaPredicted RBP5.34□□□□□ -1.55
CCSER1-202ENST00000502478 PDCP20941 246 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 PLCD1P51178 756 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 LILRA4P59901 499 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 IQCB1Q15051 598 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 PTPN21Q16825 1174 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 ZNF260Q3ZCT1 412 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 KLHL22Q53GT1 634 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 KIRREL2Q6UWL6 708 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 Q6ZWC4 215 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 ZC3H10Q96K80 434 aaKnown RBP5.34□□□□□ -1.55
CCSER1-202ENST00000502478 PUS7Q96PZ0 661 aaKnown RBP5.34□□□□□ -1.55
CCSER1-202ENST00000502478 THAP7Q9BT49 309 aaPredicted RBP5.34□□□□□ -1.55
CCSER1-202ENST00000502478 GABRQQ9UN88 632 aa5.34□□□□□ -1.55
CCSER1-202ENST00000502478 CDC42BPBQ9Y5S2 1711 aa5.34□□□□□ -1.56
CCSER1-202ENST00000502478 PREX2Q70Z35 1606 aa5.34□□□□□ -1.56
CCSER1-202ENST00000502478 ABCA6Q8N139 1617 aa5.34□□□□□ -1.56
CCSER1-202ENST00000502478 KDM5CP41229 1560 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 GPATCH8Q9UKJ3 1502 aaKnown RBP5.33□□□□□ -1.56
CCSER1-202ENST00000502478 TNKSO95271 1327 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 POC1B-GALNT4F8VUJ3 575 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 CDK11BP21127 795 aaKnown RBP5.33□□□□□ -1.56
CCSER1-202ENST00000502478 CCKBRP32239 447 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 CDKN1CP49918 316 aaPredicted RBP5.33□□□□□ -1.56
CCSER1-202ENST00000502478 MAP2K6P52564 334 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 TPTEP56180 551 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 EXOSC9Q06265 439 aaKnown RBP5.33□□□□□ -1.56
CCSER1-202ENST00000502478 RAPGEF1Q13905 1077 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 Q4G0T1 1027 aa5.33□□□□□ -1.56
CCSER1-202ENST00000502478 FCRL6Q6DN72 434 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms