RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 DPH2Q9BQC3 489 aaPredicted RBP4.38□□□□□ -1.71
CTPS1-212ENST00000498694 LBHD1Q9BQE6 289 aaPredicted RBP4.38□□□□□ -1.71
CTPS1-212ENST00000498694 ADPGKQ9BRR6 497 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 MSTO1Q9BUK6 570 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
CTPS1-212ENST00000498694 RSAD1Q9HA92 442 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 CHST12Q9NRB3 414 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 RGS18Q9NS28 235 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 TMEM161AQ9NX61 479 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 HSPBP1Q9NZL4 362 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 KLHL42Q9P2K6 505 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 RWDD2AQ9UIY3 292 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 PLAGL2Q9UPG8 496 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 MAPK8IP1Q9UQF2 711 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 POLR3KQ9Y2Y1 108 aaPredicted RBP4.38□□□□□ -1.71
CTPS1-212ENST00000498694 PRKAB1Q9Y478 270 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 IPPQ9Y573 584 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 PLXNA4Q9HCM2 1894 aa4.38□□□□□ -1.71
CTPS1-212ENST00000498694 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
CTPS1-212ENST00000498694 TTC28Q96AY4 2481 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 VWA8A3KMH1 1905 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TTC26A0AVF1 554 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 BICDL2A1A5D9 508 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CLDN3O15551 220 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 EXTL3O43909 919 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 B4GALT3O60512 393 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GREM1O60565 184 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 LEFTY1O75610 366 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TGFB1P01137 390 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ACRP10323 421 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 FGFR1P11362 822 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ACTN1P12814 892 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 MLH1P40692 756 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SOX9P48436 509 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CASP4P49662 377 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CYP2J2P51589 502 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 FAM189BP81408 668 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CYP24A1Q07973 514 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 DSC1Q08554 894 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 BFSP1Q12934 665 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GRIK3Q13003 919 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 COL9A2Q14055 689 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 RAB33AQ14088 237 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 PSMD6Q15008 389 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 IQCB1Q15051 598 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SNRNP35Q16560 246 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 KYAT1Q16773 422 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 C1orf220Q5T0J3 134 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ANKRD40Q6AI12 368 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ISM2Q6H9L7 571 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SLFN12LQ6IEE8 588 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SASS6Q6UVJ0 657 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ZNF365Q70YC5 407 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SLC24A5Q71RS6 500 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 APTXQ7Z2E3 356 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 APBB1IPQ7Z5R6 666 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 FILIP1Q7Z7B0 1213 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 RTN4RL1Q86UN2 441 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 IRF2BP1Q8IU81 584 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TRIM59Q8IWR1 403 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 DHX40Q8IX18 779 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SYCP3Q8IZU3 236 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 LRRC43Q8N309 656 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GPD1LQ8N335 351 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 XXYLT1Q8NBI6 393 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GSTCDQ8NEC7 633 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CXorf38Q8TB03 319 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 POMGNT1Q8WZA1 660 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GATA6Q92908 595 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 NKD1Q969G9 470 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 SLC35C1Q96A29 364 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 ZNF689Q96CS4 500 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 BORCS6Q96GS4 357 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 EAF1Q96JC9 268 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CNOT6LQ96LI5 555 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 PPP1R10Q96QC0 940 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 CGRRF1Q99675 332 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TSG101Q99816 390 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 LRRC4CQ9HCJ2 640 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TOPORSQ9NS56 1045 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 RBAKQ9NYW8 714 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TJP2Q9UDY2 1190 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 KLHL3Q9UH77 587 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 AGO2Q9UKV8 859 aaKnown RBP4.37□□□□□ -1.71
CTPS1-212ENST00000498694 GIT1Q9Y2X7 761 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 C2CD2Q9Y426 696 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 NFE2L3Q9Y4A8 694 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 HES2Q9Y543 173 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 PCDHB2Q9Y5E7 798 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 EYSQ5T1H1 3165 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TRANK1O15050 2925 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 PATJQ8NI35 1801 aa4.37□□□□□ -1.71
CTPS1-212ENST00000498694 TRIP11Q15643 1979 aa4.36□□□□□ -1.71
CTPS1-212ENST00000498694 GOLGA8IPA6NC78 632 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms