RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CD44P16070 742 aaKnown RBP19.56■□□□□ 0.72
HOXD11-202ENST00000498438 MRE11P49959 708 aa19.56■□□□□ 0.72
HOXD11-202ENST00000498438 FKBP3Q00688 224 aaKnown RBP19.56■□□□□ 0.72
HOXD11-202ENST00000498438 SLC22A12Q96S37 553 aa19.56■□□□□ 0.72
HOXD11-202ENST00000498438 NIF3L1Q9GZT8 377 aa19.56■□□□□ 0.72
HOXD11-202ENST00000498438 KIF9Q9HAQ2 790 aa19.56■□□□□ 0.72
HOXD11-202ENST00000498438 TDP1Q9NUW8 608 aa19.56■□□□□ 0.72
HOXD11-202ENST00000498438 NDRG2Q9UN36 371 aaKnown RBP19.56■□□□□ 0.72
HOXD11-202ENST00000498438 MYH10P35580 1976 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 HELZP42694 1942 aaKnown RBP19.55■□□□□ 0.72
HOXD11-202ENST00000498438 TRAV19A0A0A6YYK7 116 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 C2orf78A6NCI8 922 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 STX10O60499 249 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 DMDP11532 3685 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 CCDC130P13994 396 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 CCNE1P24864 410 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
HOXD11-202ENST00000498438 SOX9P48436 509 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 PLCB2Q00722 1185 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 ZNF268Q14587 947 aaPredicted RBP19.55■□□□□ 0.72
HOXD11-202ENST00000498438 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
HOXD11-202ENST00000498438 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 PAQR9Q6ZVX9 377 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 UNC93AQ86WB7 457 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 CCDC150Q8NCX0 1101 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 TTC8Q8TAM2 541 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 RIN3Q8TB24 985 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 FAM3CQ92520 227 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 SEMA4DQ92854 862 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 NELL2Q99435 816 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 KRT82Q9NSB4 513 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 THG1LQ9NWX6 298 aaKnown RBP19.55■□□□□ 0.72
HOXD11-202ENST00000498438 GTSE1Q9NYZ3 720 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
HOXD11-202ENST00000498438 BIN1O00499 593 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 CKMP06732 381 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 USP17L7P0C7H9 530 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 BMP6P22004 513 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 KPNA1P52294 538 aaPredicted RBP19.54■□□□□ 0.72
HOXD11-202ENST00000498438 UBE2HP62256 183 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 TNK2Q07912 1038 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 INCA1Q0VD86 236 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 IFRD2Q12894 506 aaPredicted RBP19.54■□□□□ 0.72
HOXD11-202ENST00000498438 C1orf210Q8IVY1 113 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 FUKQ8N0W3 1084 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 ZNF687Q8N1G0 1237 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 CRYBG2Q8N1P7 616 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 FBXL13Q8NEE6 735 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 CLDN23Q96B33 292 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 SMARCD1Q96GM5 515 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 DHTKD1Q96HY7 919 aaPredicted RBP19.54■□□□□ 0.72
HOXD11-202ENST00000498438 TWNKQ96RR1 684 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 CYP2S1Q96SQ9 504 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 KCNK16Q96T55 309 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 CYP3A43Q9HB55 503 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
HOXD11-202ENST00000498438 FAM49BQ9NUQ9 324 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 TRPM5Q9NZQ8 1165 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 GCNT4Q9P109 453 aa19.54■□□□□ 0.72
HOXD11-202ENST00000498438 NCAM2O15394 837 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 AP1G2O75843 785 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 CD58P19256 250 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 PPP1R2P41236 205 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 MAGEA9P43362 315 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 MLLT6P55198 1093 aaPredicted RBP19.53■□□□□ 0.72
HOXD11-202ENST00000498438 FZD5Q13467 585 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 MORC3Q14149 939 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 CBWD6Q4V339 395 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 CBWD3Q5JTY5 395 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 CBWD5Q5RIA9 395 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 KLHL10Q6JEL2 608 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 ARL14EPQ8N8R7 260 aaPredicted RBP19.53■□□□□ 0.72
HOXD11-202ENST00000498438 C12orf29Q8N999 325 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 SLC2A14Q8TDB8 520 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 MSANTD3Q96H12 275 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 C8orf33Q9H7E9 229 aaPredicted RBP19.53■□□□□ 0.72
HOXD11-202ENST00000498438 VPS13AQ96RL7 3174 aa19.53■□□□□ 0.72
HOXD11-202ENST00000498438 PPP1R3GB7ZBB8 358 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 SPECC1L-ADORA2AF8WAN1 911 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 CTHP32929 405 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 NBL1P41271 181 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 RPS9P46781 194 aaKnown RBP19.52■□□□□ 0.72
HOXD11-202ENST00000498438 TAF10Q12962 218 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 USP4Q13107 963 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 ZNF77Q15935 545 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 TRIM68Q6AZZ1 485 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 NUP93Q8N1F7 819 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 TTC16Q8NEE8 873 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 NELFBQ8WX92 580 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 FAM83CQ9BQN1 747 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 GKN1Q9NS71 199 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 SPATA6Q9NWH7 488 aaPredicted RBP19.52■□□□□ 0.72
HOXD11-202ENST00000498438 RAB20Q9NX57 234 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 ARMCX3Q9UH62 379 aaPredicted RBP19.52■□□□□ 0.72
HOXD11-202ENST00000498438 CTNND2Q9UQB3 1225 aa19.52■□□□□ 0.72
HOXD11-202ENST00000498438 ZFHX2Q9C0A1 2572 aaPredicted RBP19.52■□□□□ 0.72
HOXD11-202ENST00000498438 USP34Q70CQ2 3546 aa19.52■□□□□ 0.71
HOXD11-202ENST00000498438 ZNF840PA6NDX5 716 aa19.51■□□□□ 0.71
HOXD11-202ENST00000498438 CILPO75339 1184 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms