RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 EFHD1Q9BUP0 239 aa3.07□□□□□ -1.92
USP33-210ENST00000498328 MYH16Q9H6N6 1097 aa3.07□□□□□ -1.92
USP33-210ENST00000498328 ZSWIM4Q9H7M6 989 aa3.07□□□□□ -1.92
USP33-210ENST00000498328 VSX1Q9NZR4 365 aaPredicted RBP3.07□□□□□ -1.92
USP33-210ENST00000498328 SELENONQ9NZV5 590 aa3.07□□□□□ -1.92
USP33-210ENST00000498328 MAPRE3Q9UPY8 281 aa3.07□□□□□ -1.92
USP33-210ENST00000498328 CDK12Q9NYV4 1490 aaPredicted RBP3.07□□□□□ -1.92
USP33-210ENST00000498328 C4orf47A7E2U8 309 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 DYNC1I1O14576 645 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 CLGNO14967 610 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 OFD1O75665 1012 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 SYF2O95926 243 aaKnown RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 IGKV3-20P01619 116 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 FESP07332 822 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 SBK3P0C264 359 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 BPIP17213 487 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 CHRM3P20309 590 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 SMARCA1P28370 1054 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 CLIP1P30622 1438 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 CYP2C19P33261 490 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 IRX6P78412 446 aaPredicted RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 BECN1Q14457 450 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 LEXMQ3ZCV2 418 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 MEX3CQ5U5Q3 659 aaKnown RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 CAPRIN2Q6IMN6 1127 aaKnown RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 PHLDB1Q86UU1 1377 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 MPLKIPQ8TAP9 179 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 SREK1Q8WXA9 508 aaKnown RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 DPF2Q92785 391 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 LRIG1Q96JA1 1093 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 IFT140Q96RY7 1462 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 DNAJC2Q99543 621 aaKnown RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 DPCDQ9BVM2 203 aaPredicted RBP3.06□□□□□ -1.92
USP33-210ENST00000498328 MAFFQ9ULX9 164 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 SLC45A2Q9UMX9 530 aa3.06□□□□□ -1.92
USP33-210ENST00000498328 FER1L4A9Z1Z3 1794 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 ATAD2BQ9ULI0 1458 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 GTPBP1O00178 669 aaKnown RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 SGTAO43765 313 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 PDE8AO60658 829 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 VPS4BO75351 444 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 A1BGP04217 495 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 PRKCBP05771 671 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 PDHA1P08559 390 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 CYP19A1P11511 503 aaPredicted RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 XRCC6P12956 609 aaKnown RBP eCLIP3.05□□□□□ -1.92
USP33-210ENST00000498328 PHKG2P15735 406 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 GCLCP48506 637 aaPredicted RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 ZNF135P52742 658 aaPredicted RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 FAM193AP78312 1265 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 ZXDBP98169 803 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 FAM187BQ17R55 369 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 CCDC93Q567U6 631 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 C16orf71Q8IYS4 520 aaPredicted RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 ADAMTS18Q8TE60 1221 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 DDX17Q92841 729 aaKnown RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 CCDC17Q96LX7 622 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 NLRP4Q96MN2 994 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 MACROD1Q9BQ69 325 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 CIPCQ9C0C6 399 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 TSPYL1Q9H0U9 437 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 SMOC2Q9H3U7 446 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 MRPL44Q9H9J2 332 aaKnown RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 CALCOCO1Q9P1Z2 691 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 ERRFI1Q9UJM3 462 aaPredicted RBP3.05□□□□□ -1.92
USP33-210ENST00000498328 GPR45Q9Y5Y3 372 aa3.05□□□□□ -1.92
USP33-210ENST00000498328 CCDC144AA2RUR9 1427 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 FHAD1B1AJZ9 1412 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 FHOD3Q2V2M9 1422 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 CADPSQ9ULU8 1353 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 BTBD19C9JJ37 291 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 LINC01565O15544 149 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 BRINP1O60477 761 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 CDC45O75419 566 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 FRAT2O75474 233 aaPredicted RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 TOMM40O96008 361 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 GJB1P08034 283 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 CPEP16870 476 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 MCM5P33992 734 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 LIPAP38571 399 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 MMP14P50281 582 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 RPS13P62277 151 aaKnown RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 HABP2Q14520 560 aaPredicted RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 FLYWCH1Q4VC44 716 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 OTUD3Q5T2D3 398 aaPredicted RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 TMEM63BQ5T3F8 832 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 VPS53Q5VIR6 699 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 TMEM108Q6UXF1 575 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 OR2I1PQ8NGU4 316 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 IFI44Q8TCB0 444 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 NRG4Q8WWG1 115 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 RAB24Q969Q5 203 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 AHCYL2Q96HN2 611 aaKnown RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 SIGLEC11Q96RL6 698 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 CCDC94Q9BW85 323 aaPredicted RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 CCM2LQ9NUG4 571 aaPredicted RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 FANCLQ9NW38 375 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 TMEM51Q9NW97 253 aa3.04□□□□□ -1.92
USP33-210ENST00000498328 SIDT1Q9NXL6 827 aaKnown RBP3.04□□□□□ -1.92
USP33-210ENST00000498328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms