RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 REXO5Q96IC2 774 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SH3GL2Q99962 352 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TBCDQ9BTW9 1192 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DHRS4Q9BTZ2 278 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LRRCC1Q9C099 1032 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PCIF1Q9H4Z3 704 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FAM96AQ9H5X1 160 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FAM212BQ9NTI7 297 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 NPAP1Q9NZP6 1156 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TMEM181Q9P2C4 612 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PRKAG3Q9UGI9 489 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PRSS50Q9UI38 385 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ING1Q9UK53 422 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 KIAA1257Q9ULG3 409 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MGAT4AQ9UM21 535 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CDK11AQ9UQ88 783 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SMC3Q9UQE7 1217 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PLEKHA6Q9Y2H5 1048 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PCDHB14Q9Y5E9 798 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PCDHA2Q9Y5H9 948 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 BRCA1P38398 1863 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PTPRQQ9UMZ3 2332 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SPATA31A3Q5VYP0 1347 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PNPLA7Q6ZV29 1317 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GOLGA4Q13439 2230 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PLXNA3P51805 1871 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SDK2Q58EX2 2172 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 hDV102S1A0JD36 115 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CCDC78A2IDD5 438 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 EML1O00423 815 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TRAFD1O14545 582 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 VILLO15195 856 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF185O15231 689 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FOXP2O15409 715 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 HNRNPRO43390 633 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 BNIP3LO60238 219 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ACTL6BO94805 426 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DUS4LO95620 317 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 AFPP02771 609 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 P04436 131 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SSBP05455 408 aaKnown RBP eCLIP1.53□□□□□ -2.16
XRN1-214ENST00000498077 S100A9P06702 114 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CLK3P49761 638 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MANFP55145 182 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 KCNK10P57789 538 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 HERVK_113P62684 666 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RPP38P78345 283 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 RBP5P82980 135 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CHAF1AQ13111 956 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 TNK1Q13470 666 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DRP2Q13474 957 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KRT31Q15323 416 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ANO4Q32M45 955 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 WDR72Q3MJ13 1102 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 LRRC23Q53EV4 343 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCID2Q5JVF3 399 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 IQSEC1Q6DN90 963 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC35E4Q6ICL7 350 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CYP4F22Q6NT55 531 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC30A6Q6NXT4 461 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DPY19L3Q6ZPD9 716 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 BTLAQ7Z6A9 289 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CPNE8Q86YQ8 564 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GLYCTKQ8IVS8 523 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SPERTQ8NA61 448 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FANCBQ8NB91 859 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TMEM178AQ8NBL3 297 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 NUP43Q8NFH3 380 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CEP76Q8TAP6 659 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 WDR20Q8TBZ3 569 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAIP1Q8WWC4 291 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FOXD4L4Q8WXT5 416 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MKL1Q969V6 931 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ATF6BQ99941 703 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZPBPQ9BS86 351 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 HERPUD2Q9BSE4 406 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 POLR3CQ9BUI4 534 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 POLDIP3Q9BY77 421 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MMP28Q9H239 520 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SNX25Q9H3E2 840 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TMPRSS5Q9H3S3 457 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF552Q9H707 407 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 IPPKQ9H8X2 491 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DZANK1Q9NVP4 752 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GDAP2Q9NXN4 497 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TRPM5Q9NZQ8 1165 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ADGRE2Q9UHX3 823 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KCNG2Q9UJ96 466 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 OGDHLQ9ULD0 1010 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ITM2BQ9Y287 266 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KLHL20Q9Y2M5 609 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCDHGA1Q9Y5H4 931 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GPR75-ASB3A0A0A6YYF3 556 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 A0A1B0GTW7 788 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PTPDC1A2A3K4 754 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 E9PBE3 544 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TPP1O14773 563 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ITM2AO43736 263 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ACTL6AO96019 429 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms