RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 HIST1H2AJQ99878 128 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 H2AFJQ9BTM1 129 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 KLHL25Q9H0H3 589 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 THRAP10827 490 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 PSMC3P17980 439 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 SLC9A1P19634 815 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 TTMPQ5BVD1 217 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
LRRC55-201ENST00000497933 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
LRRC55-201ENST00000497933 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
LRRC55-201ENST00000497933 RALBP11234 206 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PSMA4P25789 261 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 SREBF1P36956 1147 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 RGS7P49802 495 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 BACE1P56817 501 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ZNF484Q5JVG2 852 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 RAB42Q8N4Z0 105 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 FAR2Q96K12 515 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ZFYVE19Q96K21 471 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PRMT6Q96LA8 375 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 TARS2Q9BW92 718 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PRDM5Q9NQX1 630 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 FKBP9O95302 570 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 TCF7P36402 384 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KCNJ1P48048 391 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 NPEPPSP55786 919 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PDK1Q15118 436 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PRAMEF18Q5VWM3 479 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 FKBP9P1Q75LS8 142 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 RNF180Q86T96 592 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ARID3BQ8IVW6 561 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CCDC103Q8IW40 242 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 JADE3Q92613 823 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 MCEEQ96PE7 176 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 MRPS26Q9BYN8 205 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 STK25O00506 426 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 TAF6P49848 677 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 SH3KBP1Q96B97 665 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PLEKHA8Q96JA3 519 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 EPS8L2Q9H6S3 715 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 GDF3Q9NR23 364 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ADARB2Q9NS39 739 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 SRRM3A6NNA2 597 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PYGMP11217 842 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 C4BPBP20851 252 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CDC25CP30307 473 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 RGS2P41220 211 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 SLC26A2P50443 739 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 FCGRTP55899 365 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ST8SIA6P61647 398 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 MTFR1Q15390 333 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 MEI1Q5TIA1 1274 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CDKAL1Q5VV42 579 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CATSPERBQ9H7T0 1116 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 LOC100653049A0A140TA62 436 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KRT34O76011 436 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ADARP55265 1226 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 SLC13A5Q86YT5 568 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 ZNF786Q8N393 782 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 HPDLQ96IR7 371 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 AFF4Q9UHB7 1163 aaKnown RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 KIAA1257Q9ULG3 409 aa11.69□□□□□ -0.54
LRRC55-201ENST00000497933 CORO1CQ9ULV4 474 aaPredicted RBP11.69□□□□□ -0.54
LRRC55-201ENST00000497933 EEF2KO00418 725 aaKnown RBP11.68□□□□□ -0.54
LRRC55-201ENST00000497933 OGTO15294 1046 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 CELF2O95319 508 aaKnown RBP11.68□□□□□ -0.54
LRRC55-201ENST00000497933 TCN1P20061 433 aaPredicted RBP11.68□□□□□ -0.54
LRRC55-201ENST00000497933 LRRC74BQ6ZQY2 392 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 SHCBP1Q8NEM2 672 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 H2AFY2Q9P0M6 372 aaPredicted RBP11.68□□□□□ -0.54
LRRC55-201ENST00000497933 ZNF839A8K0R7 811 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 ZNF263O14978 683 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 TOMM70O94826 608 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 DLGAP3O95886 979 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 KLRK1P26718 216 aa11.68□□□□□ -0.54
LRRC55-201ENST00000497933 OASLQ15646 514 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms