RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
FAM3A-220ENST00000497506 SHKBP1Q8TBC3 707 aa17.18■□□□□ 0.34
FAM3A-220ENST00000497506 TRMT2BQ96GJ1 504 aaKnown RBP17.18■□□□□ 0.34
FAM3A-220ENST00000497506 GPR88Q9GZN0 384 aa17.18■□□□□ 0.34
FAM3A-220ENST00000497506 CD320Q9NPF0 282 aa17.18■□□□□ 0.34
FAM3A-220ENST00000497506 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.34
FAM3A-220ENST00000497506 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
FAM3A-220ENST00000497506 O00370 1275 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FOXN3O00409 490 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-220ENST00000497506 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 EPHB6O15197 1021 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FAM200BP0CF97 657 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 KRT5P13647 590 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 CD19P15391 556 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 GJA1P17302 382 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 CEBPBP17676 345 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 GABRR2P28476 465 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 MAP3K7CLP57077 242 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 USP46P62068 366 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FANCCQ00597 558 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FILIP1LQ4L180 1135 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 DENND5BQ6ZUT9 1274 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 TMEM150AQ86TG1 271 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 NPAS3Q8IXF0 933 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 ZDHHC14Q8IZN3 488 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 ING5Q8WYH8 240 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FGF13Q92913 245 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 ACSF2Q96CM8 615 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-220ENST00000497506 UHRF1Q96T88 793 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-220ENST00000497506 TTLL2Q9BWV7 592 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 DUSP16Q9BY84 665 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 FAM207AQ9NSI2 230 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-220ENST00000497506 CDH7Q9ULB5 785 aa17.17■□□□□ 0.34
FAM3A-220ENST00000497506 MAGED2Q9UNF1 606 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-220ENST00000497506 A0A0C4DFX4 3053 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 A0A1W2PRU2 124 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 HHLA1C9JL84 531 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 FGF19O95750 216 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 SERPINC1P01008 464 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 F11P03951 625 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 LAMP2P13473 410 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 NPR3P17342 541 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 RFX1P22670 979 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 BRD2P25440 801 aaKnown RBP17.16■□□□□ 0.34
FAM3A-220ENST00000497506 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
FAM3A-220ENST00000497506 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
FAM3A-220ENST00000497506 NR1I3Q14994 352 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 CNGA2Q16280 664 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 GOLGA7BQ2TAP0 167 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 TTC30AQ86WT1 665 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 NUP93Q8N1F7 819 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 TDRD5Q8NAT2 981 aaKnown RBP17.16■□□□□ 0.34
FAM3A-220ENST00000497506 ANKRD52Q8NB46 1076 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 IL37Q9NZH6 218 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 EPS15L1Q9UBC2 864 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
FAM3A-220ENST00000497506 ANAPC1Q9H1A4 1944 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PNMA6AP0CW24 399 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 CLCN1P35523 988 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 USP8P40818 1118 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 POLR2FP61218 127 aaKnown RBP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 RAPGEF1Q13905 1077 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 TEAD2Q15562 447 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PKDCCQ504Y2 493 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 LCLAT1Q6UWP7 414 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 GJD3Q8N144 294 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 MCRS1Q96EZ8 462 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PCMTD1Q96MG8 357 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 PNPLA8Q9NP80 782 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 UXTQ9UBK9 157 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 DAAM1Q9Y4D1 1078 aa17.15■□□□□ 0.34
FAM3A-220ENST00000497506 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-220ENST00000497506 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 CYP26A1O43174 497 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 TADA3O75528 432 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 CDC25CP30307 473 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 SLC5A3P53794 718 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 STILQ15468 1287 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 STXBP5Q5T5C0 1151 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 SCAMP5Q8TAC9 235 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 UBA3Q8TBC4 463 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 ZSWIM3Q96MP5 696 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 GDE1Q9NZC3 331 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 EHD2Q9NZN4 543 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 HESX1Q9UBX0 185 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 LIMD1Q9UGP4 676 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 VCANP13611 3396 aa17.14■□□□□ 0.33
FAM3A-220ENST00000497506 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 FAM92AA1XBS5 289 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms