RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PDGFRAP16234 1089 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CPEP16870 476 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 HSPA6P17066 643 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PI3P19957 117 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CDH3P22223 829 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 AXLP30530 894 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ABCG1P45844 678 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SERPINB8P50452 374 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 HADHBP55084 474 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 DLG4P78352 724 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PRR5P85299 388 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TMPRSS15P98073 1019 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PDE1BQ01064 536 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KDSRQ06136 332 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 DUSP4Q13115 394 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 DHX34Q14147 1143 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SPCS2Q15005 226 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PLEKHN1Q494U1 663 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC44A4Q53GD3 710 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 EEF1DP3Q658K8 133 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 NCAPH2Q6IBW4 605 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 OR7E24Q6IFN5 339 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SRGAP1Q7Z6B7 1085 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC41A1Q8IVJ1 513 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KSR1Q8IVT5 923 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MYCT1Q8N699 235 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ANKS4BQ8N8V4 417 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF565Q8N9K5 539 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KREMEN2Q8NCW0 462 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 OR6P1Q8NGX9 317 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 RAPGEF5Q92565 580 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 KAT2BQ92831 832 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 MRGPRX3Q96LB0 322 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CMTM3Q96MX0 182 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SMC6Q96SB8 1091 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 YME1L1Q96TA2 773 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TTC1Q99614 292 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 CHCHD6Q9BRQ6 235 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ADPGKQ9BRR6 497 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PUS3Q9BZE2 481 aaKnown RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC12A5Q9H2X9 1139 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 C12orf10Q9HB07 376 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ANLNQ9NQW6 1124 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TOPORSQ9NS56 1045 aaPredicted RBP3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 JAG2Q9Y219 1238 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 ZBTB1Q9Y2K1 713 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 PCDHB4Q9Y5E5 795 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 TNIKQ9UKE5 1360 aa3.29□□□□□ -1.88
SNRNP48-202ENST00000496946 FRMD3A2A2Y4 597 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CTAGE9A4FU28 777 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 OR5K4A6NMS3 321 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 B4DLN1 442 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SPECC1L-ADORA2AF8WAN1 911 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TLR5O60602 858 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PFDN1O60925 122 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SOCS5O75159 536 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 FGF18O76093 207 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 HLA-DRAP01903 254 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 APOA4P06727 396 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 HEXBP07686 556 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CSF2RAP15509 400 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ARF4P18085 180 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CFL1P23528 166 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 STAT5AP42229 794 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MTIF2P46199 727 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NPTX2P47972 431 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TM4SF4P48230 202 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ARFIP1P53367 373 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ALDH18A1P54886 795 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 VCPP55072 806 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EIF4A1P60842 406 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CSNK2BP67870 215 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 KRT85P78386 507 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EXOSC9Q06265 439 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 KLC1Q07866 573 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 E2F2Q14209 437 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MOGQ16653 247 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 WHAMMP3Q1A5X7 153 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 C5orf22Q49AR2 442 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CEP55Q53EZ4 464 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CEP85LQ5SZL2 805 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SNX30Q5VWJ9 437 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TMEM132EQ6IEE7 984 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ALKBH5Q6P6C2 394 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC149Q6ZUS6 474 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 USP53Q70EK8 1073 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PTF1AQ7RTS3 328 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 KDELC2Q7Z4H8 507 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM83AQ86UY5 434 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 VSIG1Q86XK7 387 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IGDCC3Q8IVU1 814 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CBARPQ8N350 705 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP18Q8N392 663 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SYNPOQ8N3V7 929 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CNTD1Q8N815 330 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 OR52K1Q8NGK4 314 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PLBD2Q8NHP8 589 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 RNF139Q8WU17 664 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TTC17Q96AE7 1141 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms