RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
NEK4-206ENST00000496822 MAPK8IP1Q9UQF2 711 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 FRYLO94915 3013 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 WDR87Q6ZQQ6 2873 aa16.08■□□□□ 0.16
NEK4-206ENST00000496822 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 OTOGLQ3ZCN5 2332 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 EP300Q09472 2414 aaPredicted RBP16.07■□□□□ 0.16
NEK4-206ENST00000496822 ZNF292O60281 2723 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 TRIM66O15016 1216 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 FAM163BP0C2L3 166 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 USP17L7P0C7H9 530 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 ANXA13P27216 316 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 AP3M2P53677 418 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 ZXDBP98169 803 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 ZACNQ401N2 412 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 PKN3Q6P5Z2 889 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 SPEM1Q8N4L4 309 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 SH3RF2Q8TEC5 729 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 C8orf48Q96LL4 319 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 HINFPQ9BQA5 517 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 TTLL2Q9BWV7 592 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 HMGXB4Q9UGU5 601 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
NEK4-206ENST00000496822 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
NEK4-206ENST00000496822 K7ESF4 209 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 CXCL12P48061 93 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 IFRD2Q12894 506 aaPredicted RBP16.06■□□□□ 0.16
NEK4-206ENST00000496822 ORC1Q13415 861 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 KCNB1Q14721 858 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 DGKKQ5KSL6 1271 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 FSTL4Q6MZW2 842 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
NEK4-206ENST00000496822 SV2AQ7L0J3 742 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 FAM35AQ86V20 835 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 KIAA2013Q8IYS2 634 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 TMC2Q8TDI7 906 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 RUBCNQ92622 972 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 CEP295NLQ96MC4 621 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 FAM126AQ9BYI3 521 aaPredicted RBP16.06■□□□□ 0.16
NEK4-206ENST00000496822 ELOVL4Q9GZR5 314 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 FBRSL1Q9HCM7 1045 aaKnown RBP16.06■□□□□ 0.16
NEK4-206ENST00000496822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.16
NEK4-206ENST00000496822 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
NEK4-206ENST00000496822 ZNF840PA6NDX5 716 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 CALUO43852 315 aaPredicted RBP16.05■□□□□ 0.16
NEK4-206ENST00000496822 AKAP3O75969 853 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 ZNF202O95125 648 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 HDCP19113 662 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 NR2F2P24468 414 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
NEK4-206ENST00000496822 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 PAQR9Q6ZVX9 377 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
NEK4-206ENST00000496822 OSCP1Q8WVF1 389 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 KCNK16Q96T55 309 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 DUS2Q9NX74 493 aaKnown RBP16.05■□□□□ 0.16
NEK4-206ENST00000496822 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
NEK4-206ENST00000496822 CHURC1-FNTBB4DL54 471 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 PAPSS2O95340 614 aaPredicted RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 EGFP01133 1207 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 GJA4P35212 333 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 PIK3CAP42336 1068 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 ASPAP45381 313 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 IFNAR2P48551 515 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 FNTBP49356 437 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 VAMP7P51809 220 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 TAF10Q12962 218 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 PPP2R5DQ14738 602 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 LPAL2Q16609 132 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 NFIL3Q16649 462 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 EML3Q32P44 896 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 ACOT1Q86TX2 421 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 GUF1Q8N442 669 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 LINC00597Q9H2U6 94 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 NCDNQ9UBB6 729 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 DCHS1Q96JQ0 3298 aa16.04■□□□□ 0.16
NEK4-206ENST00000496822 HELZP42694 1942 aaKnown RBP16.04■□□□□ 0.16
NEK4-206ENST00000496822 DMXL1Q9Y485 3027 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms